Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2728 ATGGTTCAGTTTTGGTTAAAAACGGTAACGGCATTCGCCGTGAAGCCGTCACCGTTGGTGGCGTTCGTAACGGTAATCGTCATTGGCGTGGTGGGATTTTATTCGCTGCATTTTCCTTTCCATTCCGCCGCTTCCATCGACGCCTCGCGCTTCAGCCACGTGTTCCTGTCGTCGTCCTCCAACGCTACGATCTCCAACTACCTGCGCGCGCTCACCGTGCACCCTCACCTCGCGGGAACAAAAGCCGCCTCCGTAACTGCACGCTACGTGCTCAACCACTTCACCGGTCTCGGGCTCCGAGCCCACACCGCGAGGCACTCCGCGCTGTTGTCGTACCCGCTGCGCTCCTCGCTCGCGGCGCATTTTAGCGACGGTTCGAGTTTGGAGTTTCGGTTGGGGGAGGGAGAGGGGGACGAGGAGGTGGTGGCGCCGTACCACGCGTACTCGCCGTCGGGGTCGGCGTGGGCGGCGGCGGTGTTTGTGAACTACGGGCGGGAGGAGGACTTCCGGTTGTTGGCTGCGGCGGGGGTGAGGGTGGCGGGGATTGGGGCGGGGGCGGTGGTTGAGGCGGCGGAGAGGCATGGTGCGGCGGCGGTGGTGGTGTTCGGGGATGACACGTGGCCCAGGGGGTTTGAGAGGGGACACGTGATGAGAGGGGGGATTGGGGACCCGCTGAGTCCTGGGTGGGGTGGGGAGGATGGCGGTGAGAGCTTGGGTTTGGATGATAGTAAGGTTTTGAAAAGGTTTCCTAAAATTCCATCCATGCCCTTGTCTGCAGAGGCTGCTGAGAGGATCTTGGTCTCGCTTGGTGGAGCTCCTCTGCCCTTGGATTGGAGGGGTACCCTAAAGTCCTCCAAGGTTAGGAATGTTGGTCCTGGCCCCACAATGCTCAACTTCACTTATCAGGGAGAGATGAAAGTGGCTACCATTGAAAACGTTTTTGCCGTTATCAAGGGACGGGAAGAATCTGATCGCTATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCCTTACTTGACATTGCTCGTAGATATTCTATTCTATTGCGTTTGGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAGAACCTTGTCAATCTTGGTTCGAAAGCTGTAGCATACCTTAATGTAGACTGTGCTGTTCAAGGGTCTGGTTTCTTTGCTGGCTCAACTCCTCAGCTAGATGATCTCCTTCTCGATGTCATCAAAAAGGTCAACGATCCTGACTCCGAGGGTACAACGATATATCAGAGTTGGGCAGCTGCTGGTGGAAAATCTAATATTCAAAGGCTGAGTAGAGTAGATTCTGATTTTGCACCATTTGTGCAACATGCAGGGGTTCCATCTATTGATATGTATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGACAGAGTTTGGAGACCCATTCTTTCACCGCCATGTAGCTGTTACAGGAATTTGGGGGCTTCTAGCCCTGCGCCTTGCTGATGATTCCATCATACCTTTCAATTATCTGTCTTATGCGGATCAGTTACAGGTGTACAATGACATATTGAGCAACTTGTTAGAAAAGCAAATTTCTCTACATCCACTAAATGCGTCGATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGATGAATCAAAGAAACTGAGATTGCAAGAAAATTCAGATGATTTTGTGGATATGAAAATCCGAGCATTGAATGATAGACTAATGCTTACGGAAAAAGGCTTCTTGGATGTTGACGGGCTTCGAGGAAGGCAATGGTTTAGGCATCTTGTTTTTGGGCCTCACAGAGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCAATGTCTGAGTTGTTTAAAATGAGTGAAAAAGAAAGGGTGGCTGCAATTCAGCATGAGGTTTGGAGGGTTGTGAGGGCTATTCAAAGAGCTGCTTCAGCACTAAGAGGAGATTTCACCTAA 2064 0.5116 MVQFWLKTVTAFAVKPSPLVAFVTVIVIGVVGFYSLHFPFHSAASIDASRFSHVFLSSSSNATISNYLRALTVHPHLAGTKAASVTARYVLNHFTGLGLRAHTARHSALLSYPLRSSLAAHFSDGSSLEFRLGEGEGDEEVVAPYHAYSPSGSAWAAAVFVNYGREEDFRLLAAAGVRVAGIGAGAVVEAAERHGAAAVVVFGDDTWPRGFERGHVMRGGIGDPLSPGWGGEDGGESLGLDDSKVLKRFPKIPSMPLSAEAAERILVSLGGAPLPLDWRGTLKSSKVRNVGPGPTMLNFTYQGEMKVATIENVFAVIKGREESDRYVLLGNHRDAWTYGAVDPNSGTAALLDIARRYSILLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGSGFFAGSTPQLDDLLLDVIKKVNDPDSEGTTIYQSWAAAGGKSNIQRLSRVDSDFAPFVQHAGVPSIDMYYGKDYPVYHTAFDSYNWMTEFGDPFFHRHVAVTGIWGLLALRLADDSIIPFNYLSYADQLQVYNDILSNLLEKQISLHPLNASIQEFASAAKEANDESKKLRLQENSDDFVDMKIRALNDRLMLTEKGFLDVDGLRGRQWFRHLVFGPHRDHESKLDFFPGIADSMSELFKMSEKERVAAIQHEVWRVVRAIQRAASALRGDFT* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2728 687 Pfam Peptidase family M28 312 499 IPR007484 -
Pvu7g2728 687 SUPERFAMILY Transferrin receptor-like dimerisation domain 533 685 IPR036757 -
Pvu7g2728 687 Gene3D - 116 303 - -
Pvu7g2728 687 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 37 686 IPR039373 -
Pvu7g2728 687 Pfam Transferrin receptor-like dimerisation domain 558 682 IPR007365 -
Pvu7g2728 687 SUPERFAMILY Zn-dependent exopeptidases 60 530 - -
Pvu7g2728 687 Gene3D Zn peptidases 62 533 - -
Pvu7g2728 687 SUPERFAMILY PA domain 109 314 IPR046450 -
Pvu7g2728 687 Gene3D - 536 687 IPR036757 -
Pvu7g2728 687 Coils Coil 567 587 - -
Pvu7g2728 687 PANTHER F10A2.10 PROTEIN-RELATED 37 686 - -
Pvu7g2728 687 CDD M28_PSMA_like 308 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2728 Pvu-Chr7 50235339 50240391 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2728 K01301 - gmx:100817485 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2728 7 50235339 50240391 Pvu7g2728 7 50235339 50240391 ECH
Pvu1g2069 1 46530190 46534887 Pvu7g2728 7 50235339 50240391 PCT