Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2069 ATGATGCCTAAACCCATGAACGTTTTGACGACAAAGCCCTCACCTTTGAGTACCGTGGTGCTGCTGCTGATCCTCTGCATTCTGGGTTTCTACGCTATGCATTTCCCTCACTCTTCTACACCTTCCTCCGCCTCCCAAAACCTCTCTCAGGTGGAAACACTATTTCTCTCCACTTCCTCAAACTCCACCATTTCTTCCTATCTCCGCGCCCTCACCCTGCACCCTCACCTCGCCGGAACAAAACCCGGCTCCGACATCGCCCGCTACGTCCTCAACCACTTCACTTCATTGGGACTCAAGGCCCACACCGCGACATACACCACGCTCCTCTCTTTCCCGGTGCACTCCTCCCTCTCAGCTCATTTTAGCGAAGGAACCTCGGTGAGCCTCCGTCTCACAGAGCCGACCGCCGCGGGCGTGGTTCCGGCGTACCACGCGTACTCGCCGTCGGGTGCGGTGCACGCGCCCGCGGTGTTCGCGAACTACGGGAGGGAGAGGGACTACCGTGTGCTTGGCGCGATGGGAGTGAACGTGAGCGGGTGCGTGGTGGTGGTGCGGAAGGGCGGGGAGATCGGTCGCGGCGCGGTGGTGGAGAAAGCGGAGGCGCACGGGGCGGCGGCGGTGCTGGTTTACGGCGAGGGTGATACCTGGAGGAAGGGGTTTGAGAGGGGGCACGTGATGAGGGGAGGAATAGGGGACCCACTTACTCCTGGTTGGGCTGGGATTGAGGGTGGCGAGACACTGGGATTGGAAGATAGTGAGGTTTTGAAAAAGTTCCCCAAAATTCCATCTATGCCCTTGTCAGCTGAGGTCGCTGACTCTATTTTGTCCTCTCTTGGGGGTGCTCCTGTGCCCCTTGAATGGAGGGGCACCCTAAGGTCTAAGGTCAGGCATGTTGGTCCTGGCCCCACCTTCCTCAATTTCACTTACCAGGGTGAAAACAAGGTGGCCGCCATTCAAAATGTTTTTGCTGTCATAAAGGGGTCAGAAGAACCTGATCGATATGTTCTGCTTGGGAACCACAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTGCTTGACATTGCTCGTCGGTTTTCTGTTCTATTGGGCTTGGGGTGGAAGCCAAGGAGGACAATAATTCTCTGCAGTTGGGATGCAGAGGAATTTGGGATGATAGGATCTACTGAATGGGTTGAACAAAACCTTATTAATCTGGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGTGCTGTTCAAGGCCCGGGTTTCTTTGTGGGTTCAACTCCTCAGCTAGACAATCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGATTCTGAGGGCGTAGCACTATATGAGAATTGGGCTGCTTCTTCTGCTGGAAGCAATAATATTCAGAGGCTGAGTGGAGTTGATTCTGATTTTGCTCCATTTGTGCAGCACGCAGGGGTTCCATCCATTGATATGTATTATGGAAGAGATTTTCCTGTCTATCACACTGCATTCGACTCCTATAACTGGATGGCAGAGTATGCAGATCCATTCTTCCACCGCCATGTTGCTGTTACCGGAGTTTGGGGGCTTCTAGCCCTTCACTTGGCCGGCGATCCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGCTGTACAAAAACATGTTGAGCAACTTCATAGACCAGAAAATTTCCCTGTATCCATTAACTCTTTCAATTGAAGAATTTGCTTCTGCTGCCAAAGAAGTTGATGGTGAAGTAAAGAAACTGAGATTGCAAGAAACGGAAGGTTGTTCTGTAGATATGAAAAGGCGAGCATTGAATGATAGACTAATGCTTGCTGAAAAAGGGTTCTTGGATGCATATGGACTTCAAGGAAGACAGTGGTTCAAGCATCTGGTGTATGGACCTTCAAGCGACCATGAAAGGCTCAATTTCTTCCCTGGGATTTCTGATTCTATTACTAGTTCTACGGGTGTAACTGAAAGAGAAAGGCTAGCATCAATTCAACATGAGATCTGGAGGGTTGCCAGAGCCATTCACAGAGCTGCTTCTGCACTCAGAGGAGAATTCACTTAA 2091 0.5084 MMPKPMNVLTTKPSPLSTVVLLLILCILGFYAMHFPHSSTPSSASQNLSQVETLFLSTSSNSTISSYLRALTLHPHLAGTKPGSDIARYVLNHFTSLGLKAHTATYTTLLSFPVHSSLSAHFSEGTSVSLRLTEPTAAGVVPAYHAYSPSGAVHAPAVFANYGRERDYRVLGAMGVNVSGCVVVVRKGGEIGRGAVVEKAEAHGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGIEGGETLGLEDSEVLKKFPKIPSMPLSAEVADSILSSLGGAPVPLEWRGTLRSKVRHVGPGPTFLNFTYQGENKVAAIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSVLLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDNLILEVTKKVKDPDSEGVALYENWAASSAGSNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYADPFFHRHVAVTGVWGLLALHLAGDPILPFNYVSYANELQLYKNMLSNFIDQKISLYPLTLSIEEFASAAKEVDGEVKKLRLQETEGCSVDMKRRALNDRLMLAEKGFLDAYGLQGRQWFKHLVYGPSSDHERLNFFPGISDSITSSTGVTERERLASIQHEIWRVARAIHRAASALRGEFT* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2069 696 Pfam PA domain 154 215 IPR003137 -
Pvu1g2069 696 Pfam Transferrin receptor-like dimerisation domain 568 691 IPR007365 -
Pvu1g2069 696 PANTHER F10A2.10 PROTEIN-RELATED 36 696 - -
Pvu1g2069 696 CDD M28_PSMA_like 319 544 - -
Pvu1g2069 696 Gene3D - 546 696 IPR036757 -
Pvu1g2069 696 Gene3D - 116 312 - -
Pvu1g2069 696 SUPERFAMILY PA domain 109 323 IPR046450 -
Pvu1g2069 696 SUPERFAMILY Zn-dependent exopeptidases 60 541 - -
Pvu1g2069 696 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 36 696 IPR039373 -
Pvu1g2069 696 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 694 IPR036757 -
Pvu1g2069 696 Pfam Peptidase family M28 321 509 IPR007484 -
Pvu1g2069 696 Gene3D Zn peptidases 62 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2069 Pvu-Chr1 46530190 46534887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2069 K01301 - gmx:100798131 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2069 1 46530190 46534887 Pvu1g2069 1 46530190 46534887 ECH
Pvu1g2069 1 46530190 46534887 Pvu7g2728 7 50235339 50240391 PCT