Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2725 ATGGTGAATGAATTGACCAGAAGTGTTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCTAAACAAAATGTCATGAAATTGCGCTCCAAGCCTTTCAAAATCCGGGGCTGTACATGGAGGATCCTTGTGCATCCACTGAGGAGGGATGTGGACCATTTTTCAGTGTTTTTGATGGTTGCTGATTCTTTACCACCGTATGGATGGGACAGAAACACGTTTTTCAAGTTGGTTCTAATTAATCAAGTGGACAGCAATAAGTCCATTGAAAAAGGGACTAAACAGAAGTTCAATGGAGGACATCGTAGCTGGGGTTCATTTTTCTTGGATCTAAGTGATTTCTACAACCATAACCAAGGATATCTTGTGAGGAACACATGCATCATCGAGGCACACATTTGTGTATCGGATTTAGCACCTAATCTTCAAGTTCATCCTAATTGTTCTCCATCTCATGATTCTTTATCAGTTGGTCAAGCAACAAAATCATCCTCAGAAAGGGACAGCATTAGTCCAAGAACCTCAGGATCTAGTGCAGCAGAAGGGGAGATTCAAGATGCAGATAGTTTGACACTAAGAGAACTGATAGATTTGGAGAGTTTAGCAGCAGAAGAAGAAGCTTTCATTCCTCTGCTGGAAGAGGTTTGCATATGGCATCCTAATCTTATACAGAGCCAGAAGGAGAGAACTAGGAGGTTTAGACAATGGGCCTTCACATCATTGGGTCAAGTTTTGCATTTTCTCAAGACCAAAAGGGTGAAGGACATGAGTGAAGAGGACATAAAGCATCTGCATGATTTGTGGAAGGAGCTTGTGAGGTCCTCAGGGTTTGACTTGGCATGGCTGGAGCCATATGTTCAATCAGCATTGGGTTTGAAAGATTACATGGAAAGAGCAAAGCAAATGAAGAAAGTTAAGGACACTGTGGTTGCTTTGGAGATCAAGATGAAGAGGCTGAGAGGGGAACTTGCTGCTTCTGAAAGAGAGTTTGAGATTGCAAGAAGAGGGTTATCAGAAGTAAGAAGAAGTTTCAATGAGATGGATATGAACTCTGCAATTGGATATGCTATGTTTTAG 1080 0.412 MVNELTRSVDFEKFSWKIEDFSKQNVMKLRSKPFKIRGCTWRILVHPLRRDVDHFSVFLMVADSLPPYGWDRNTFFKLVLINQVDSNKSIEKGTKQKFNGGHRSWGSFFLDLSDFYNHNQGYLVRNTCIIEAHICVSDLAPNLQVHPNCSPSHDSLSVGQATKSSSERDSISPRTSGSSAAEGEIQDADSLTLRELIDLESLAAEEEAFIPLLEEVCIWHPNLIQSQKERTRRFRQWAFTSLGQVLHFLKTKRVKDMSEEDIKHLHDLWKELVRSSGFDLAWLEPYVQSALGLKDYMERAKQMKKVKDTVVALEIKMKRLRGELAASEREFEIARRGLSEVRRSFNEMDMNSAIGYAMF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2725 359 Pfam MATH domain 19 134 IPR002083 GO:0005515
Pvu7g2725 359 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 158 IPR008974 GO:0005515
Pvu7g2725 359 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Pvu7g2725 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 341 - -
Pvu7g2725 359 MobiDBLite consensus disorder prediction 154 185 - -
Pvu7g2725 359 Coils Coil 303 330 - -
Pvu7g2725 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 341 - -
Pvu7g2725 359 CDD MATH 13 134 IPR002083 GO:0005515
Pvu7g2725 359 SUPERFAMILY TRAF domain-like 13 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2725 Pvu-Chr7 50215174 50217244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2725 - - vra:106771542 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2725 7 50215174 50217244 Pvu1g2071 1 46538820 46540841 PCT