Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2696 ATGCTGAGCGTGGTGCGCGTGCACCTGCCCTCGGAAATTCCCATTGTAGGCTGCGAACTCACACCCTACGTCCTCCTTCGCCGCCCCGACAAGAGCGTTTCCACCGACGATGTTCCTGAAACCGCCCCTTTAGACGGCCATTTCCTCCGCTACAAATGGTATCGTGTACAGAGTGATAAAAAAGTTGCTGTCTGTAGCATACATCCGTCAGAGCAAGCCACACTGCAATGCCTAGGTTGTGTTAAGGCAAAAATTCCCCTTTCCAAGAGTTACCATTGCACCACAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCTGCAAGTGCTCTTAATGAAAATGGAAATGAGGAGGAAGAGGTGTTTGGGCGCTTTAATAGTACTGGGTCTGGGGCAATAAATTCCAGCTTATCTGCTTCTGCTTCAAGTGCTAGCTTGGCAAATGGGTCTGCAACACCTTTGTATCCCGCTGCTGTAACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAGACTTATACCCCTACTGCTGATGATGTTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCTGTGGGACCTGTTAACACTATACTAACTTCACGTGTCATTCCTGCTCCTTCACCTATTCCACGCCGGCAGATTCGTGTTGATGGAATGGGGCATATAGATGTGGATGGAAGAATGACAACTTCAGGAACTTTTACTGTTCTATCCTACAATATATTGTCTGAAGCATATGTCTCTAATGATCTATACAATTACTGCCCTTCGTGGGCACTTTCTTGGCCATATCGCCGGCAAAATTTGTTACGAGAAATTGTTGGTTACCGTGCAGACATTATTTGTCTTCAGGAGGTTCAAAGTGATCATTATGACGATTTTTTCTCTCCTGAACTGGACAAACATGGATATTATGGTCTTTACAAGAGAAAAACAAACGAGGTGTACAGTAGCAACACAAATACAATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCTTTGACAGAGGCTACAATTCCAACCACTCAGAAAAAAAGTGCCTTGAATCGACTGGTTAAGGATAATGTTGCACTAATTGTGGTTCTAGAAGCAAAAGTTAACAATCAACCTTTTGATAATCCTGGGAAAAGACAGCTTCTTTGCGTGGCAAATACACATGTAAATGTCCCGCAAGATTTAAAGGATGTGAAACTGTGGCAGGTTCACACTCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCGGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCACTTAACATTTTACGTCCTCACAGCAAGTTGGTTCATCAGTTGCCATTGGTCAGTGCATACTCATCTTTTGCGAGAACTGTTAGCCTTGGATATGATCAGCATAAAAGGAGACTGGATGGTGGAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCTTTGGTTGTGGAGTCATTATTGGAGTTACTGGATGAGGAGAGTTTGAGGAAGGACACTGCACTTCCTTCACCTGAATGGTCCTCAGATCACATAGCTCTCTTAGCTGAGTTCCGCTGCTGCAAAAATAAATCTAGGCGTTGA 1803 0.4315 MLSVVRVHLPSEIPIVGCELTPYVLLRRPDKSVSTDDVPETAPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPLSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSGAINSSLSASASSASLANGSATPLYPAAVTQRSGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGPVNTILTSRVIPAPSPIPRRQIRVDGMGHIDVDGRMTTSGTFTVLSYNILSEAYVSNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDDFFSPELDKHGYYGLYKRKTNEVYSSNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKSALNRLVKDNVALIVVLEAKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVSLGYDQHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2696 600 Gene3D Endonuclease/exonuclease/phosphatase 221 599 IPR036691 -
Pvu7g2696 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Pvu7g2696 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 597 - -
Pvu7g2696 600 CDD Deadenylase_CCR4 252 593 - -
Pvu7g2696 600 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 597 - -
Pvu7g2696 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2696 Pvu-Chr7 50033566 50041638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2696 278 480 EF-hand Containing Proteins AT5G54130 25.234 1.22e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2696 K12603 - gmx:100819402 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2696 7 50033566 50041638 Pvu7g2696 7 50033566 50041638 ECH
Pvu1g2080 1 46637579 46644741 Pvu7g2696 7 50033566 50041638 PCT