Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2680 ATGGATTCTTGTTCTGATCACTCTCCTTCGTCATCTCTTCATTCTACTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACGAAGCATGGAATACCTGAAGGAGAAGAAAGATTCAGAGCCATATGTACCAGCTGTGGGAAGATTTCCTATCAGAACCCGAAAATGGTAGTTGGTTGCCTCATTGAACACGATAACAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCATCTTATGGCCTATGGACACTTCCTGCTGGTTATCTGGAAATTGGAGAGTCAGCTATGGAAGGTGCCATCAGGGAAACAAGGGAGGAAGCCAATGCGGATGTGGAAGTGATTTCTCCCTTTGCTCAACTAGATATTCCTTTAATTGGCCAGACTTATATAATCTTCTTAGCAAGGTTGAAAACCCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTCCCTCTGAATGAAATACCTTTCAGTTCTCTATCCTTTTCATCAATGGTGGTCACTTTAAGTTTGTATGTTGAAGATATGAAGGCAGGAAGAAAGCCTAAATTCCATTATGGTACTATTAACAAAAGGCCTGGTACTAGTGCTTCTGACATTCATGCCTACACACTGGATCAACATATGCAGTCATGA 657 0.4247 MDSCSDHSPSSSLHSTGDVQNVKFCQWCGGPTKHGIPEGEERFRAICTSCGKISYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYIIFLARLKTPHFSPGPESSECQLFPLNEIPFSSLSFSSMVVTLSLYVEDMKAGRKPKFHYGTINKRPGTSASDIHAYTLDQHMQS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2680 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
Pvu7g2680 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Pvu7g2680 218 Gene3D - 20 56 - -
Pvu7g2680 218 PANTHER BNAA03G19740D PROTEIN 11 217 - -
Pvu7g2680 218 PANTHER NUDIX HYDROLASE 23 11 217 - -
Pvu7g2680 218 Pfam NUDIX domain 61 162 IPR000086 -
Pvu7g2680 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
Pvu7g2680 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Pvu7g2680 218 SUPERFAMILY Nudix 23 182 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2680 Pvu-Chr7 49813301 49816365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2680 K18453 - gmx:100777180 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2680 7 49813301 49816365 Pvu7g2680 7 49813301 49816365 ECH
Pvu1g1484 1 39195787 39200280 Pvu7g2680 7 49813301 49816365 PCT