Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1484 ATGATGGTGAAAGGAATCCAGATTCAGATATGTGGATTGGTAAGTCAACGATGGATCCAGAAACCCCGCACATTCTCATCCTTCTCATTTTCCCCAATTCCACACCCTAATCCTTATTCCAAACTGCTTCCCACCAAAACCATCGTTCGTAGGGTTCGATTCGCGCCATTTCACGCTTCCTCGACACCGCTTCCTTCTGCCGGAAATGTTCGAAACATGAAGTTCTGTCAGTGGTGTGGTGGTTCTACGAAGCATGATATTCCTGAAGGGGAAGAAAAGTTGAGAGCTATATGTACGGTTTGTGGGAAGATTGCGTATCAAAATCCGAAGATGGTAGTTGGCTGCCTCGTTGAACATGATAACAAGGTGCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACACTTCCTGCTGGTTATTTAGAAATTGGAGAGTCGGCTGTGGATGGTGCCATAAGAGAAACAAGGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCATTTGCCCAACTGGATATTCCTTTAATCGGCCAAATTTATTTGATATTCTTGGCAAAGCTGAAGAAGCCGCATTTTTCACCTGGTCCGGAATCATCAGCATGCCAACTTTTTCCAATTGACGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATATTAAGACTGGAAAACTCAAATTCCATTATGGAACCATCAACAAAAGGCCGGGTACAAGTCCTTCTGATATTCGTGCCTATACACTGGATCATCACATGCAGTCATGA 807 0.4287 MMVKGIQIQICGLVSQRWIQKPRTFSSFSFSPIPHPNPYSKLLPTKTIVRRVRFAPFHASSTPLPSAGNVRNMKFCQWCGGSTKHDIPEGEEKLRAICTVCGKIAYQNPKMVVGCLVEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVDGAIRETREEANADVEVISPFAQLDIPLIGQIYLIFLAKLKKPHFSPGPESSACQLFPIDDIPFNSLSFSSMVVTLSLYVEDIKTGKLKFHYGTINKRPGTSPSDIRAYTLDHHMQS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1484 268 Pfam NUDIX domain 112 213 IPR000086 -
Pvu1g1484 268 PANTHER BNAA03G19740D PROTEIN 53 267 - -
Pvu1g1484 268 ProSiteProfiles Nudix hydrolase domain profile. 108 231 IPR000086 -
Pvu1g1484 268 Gene3D - 72 107 - -
Pvu1g1484 268 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 108 259 - -
Pvu1g1484 268 PANTHER NUDIX HYDROLASE 23 53 267 - -
Pvu1g1484 268 Pfam Nudix N-terminal 74 107 IPR029401 -
Pvu1g1484 268 ProSitePatterns Nudix box signature. 142 163 IPR020084 GO:0016787
Pvu1g1484 268 SUPERFAMILY Nudix 74 232 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1484 Pvu-Chr1 39195787 39200280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1484 K18453 - gmx:100808417 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1484 1 39195787 39200280 Pvu1g1484 1 39195787 39200280 ECH
Pvu1g1484 1 39195787 39200280 Pvu7g2680 7 49813301 49816365 PCT