Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2672 ATGGGAGGTGGTGGCCGAAGCTCTGCTCCTAAACAGAGAAACTCAGGGGAAGATGAGGTTTCGAAGAAGCGCGTTCCACACGCAAAACCACCGTTCAGTCTCAGCCAAGTGAAGAAAGCGATTCCGCCGCACTGTTTTCAGCGTTCGGTCATTCGTTCCTTCTCCTACGTCTTCTACGACCTCGCCATAGCCTCATCTCTGTTCTACCTGGCCTTGAACTACTTCTCTACCCTTCCCAACAACCTCTCCCTCTTCGCCTGGCCCCTCTACTGGATAATCCAAGGCTCCGTCCTCACCGGCGTTTGGGTCATAGCGCACGAGTGTGGCCACCACGCTTTCAGCGATTACCAGTGGCTCGATGACTCGGTTGGTCTTGTTCTCCATTCGTTTCTTCTGGTGCCCTATTTTTCGTGGAAATACAGCCACCGCCGCCACCACTCCAACACGGGGTCTCTTGAACGTGACGAAGTGTTTGTGCCGAAAACAAAGGCCAGCATTCGTTGGTATTCCAAGTACCTCAACAACCCTGTTGGGAGAGTTCTCACTCTGTTTATCACCCTGACCCTTGGTTGGCCTCTGTACTTGGCCTTCAACGTTTCGGGTAGGAACTACGAACGTTTCGCCTGCCACTATGACCCTTATGGTCCCATTTACTCAGACCGTGAAAGGCTTCAGATTTATGTCTCCGATGTTGGGGTTCTAGCCGTGTGTTATGGCCTCTACAAGCTTGTCTTGGCAAAAGGGTTCCTTTGGGTGGTTTGTGTTTATGGGGTGCCTTTGATGGTGGTGAATGCGTTGTTGGTGTTGATCACTTTCTTGCAGCACACTCACCCTGCGGTTCCACACTACGACTCCTCCGAGTGGGATTGGTTCAGAGGGGCATTGGCCACTGTGGACAGAGATTACGGGATTCTCAACAAGGTTCTGCATAACATCACTGACACACACATTGCACACCACCTGTTCTCCACAATGCCGCATTACCATGCAATGGAAGCCACCAAGGCCATAAAACCGATTTTGGGAGACTATTATCACTTTGATGGGACTTCTGTGTATAAGGCAATGTGGAGAGAGGCAAGAGAGTGCATGTACGTTGATGAAGATTCTAAGAACAATGGTGTTTACTGGTACAACAATAAGGTGGAATGA 1152 0.5043 MGGGGRSSAPKQRNSGEDEVSKKRVPHAKPPFSLSQVKKAIPPHCFQRSVIRSFSYVFYDLAIASSLFYLALNYFSTLPNNLSLFAWPLYWIIQGSVLTGVWVIAHECGHHAFSDYQWLDDSVGLVLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKASIRWYSKYLNNPVGRVLTLFITLTLGWPLYLAFNVSGRNYERFACHYDPYGPIYSDRERLQIYVSDVGVLAVCYGLYKLVLAKGFLWVVCVYGVPLMVVNALLVLITFLQHTHPAVPHYDSSEWDWFRGALATVDRDYGILNKVLHNITDTHIAHHLFSTMPHYHAMEATKAIKPILGDYYHFDGTSVYKAMWREARECMYVDEDSKNNGVYWYNNKVE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2672 383 CDD Delta12-FADS-like 48 330 - -
Pvu7g2672 383 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
Pvu7g2672 383 PANTHER OLEATE HYDROXYLASE FAH12 1 381 - -
Pvu7g2672 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 381 - -
Pvu7g2672 383 MobiDBLite consensus disorder prediction 12 26 - -
Pvu7g2672 383 Pfam Domain of unknown function (DUF3474) 16 66 IPR021863 GO:0016717
Pvu7g2672 383 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2672 Pvu-Chr7 49753576 49756264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2672 1 382 Lipid Metabolism Gene Families AT3G12120 71.615 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2672 K10256 - gmx:100780912 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2672 7 49753576 49756264 Pvu7g2672 7 49753576 49756264 ECH
Pvu1g1478 1 39136762 39142808 Pvu7g2672 7 49753576 49756264 PCT