Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1478 ATGGGGGCTGGTGGCCGAACCTTTGTCCCTCCTGCCAACAGGAAATCAGAGGCCGACCCTCTGAAGCGGGTGCCATTTGAAAAACCTCCTTTTAGCCTCAGCCAGATCAAGAAAGCCATCCCACCTCACTGTTTCCAGCGCTCTGTTCTCCGCTCATTCTCTTATGTCATTTATGATCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCACTACTTTCACACCCTTCCCCGTCCTCTCTCTTTCCTTGCATGGCCAATCTACTGGGCTGTCCAAGGTTGTATCCTCACTGGCGTTTGGGTCATTGCTCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGCTGCTCGATGATATCGTTGGCCTTGTTCTCCATTCTGCTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCATCACTCCAACACCGGTTCTCTTGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAATCCGGCATGAAGTGGTACTCTAAATACCTTAACAATCCATTAGGCAGAGTCCTCACACTAGTCATCACCCTCACTCTTGGTTGGCCCCTGTACTTGGCTTTTAATGTGTCAGGCAGGCCTTATGAAAGGTTTGCTTGCCACTATGATCCTTATGGTCCTATTTACACTGATCGTGAACGAATGCAAATATATATATCAGATGCAGGAGTACTTGCAGTGTGCTATGGCCTTTTCCATCTTGCAATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCATTGCTAGTGGTCAATGGATTTCTAGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTACCACACTACAATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTCTGGCAACGGTTGATAGAGATTATGGAATTTTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTAATCTCTACAATGCCGCATTATCATGCAATGGAGGCTACAAAAGCAATAAAGCCTATTTTGGGAGAGTATTATCGGCTTGACGAGACTCCATTTGTGAAGGCAATGTGGAGAGAGGCAAGAGAGTGCATCTACGTGGAGCCAGATCACGGTACTGAGCACAAAGGTGTATTTTGGTACAAGAATAAGTTGTGA 1152 0.467 MGAGGRTFVPPANRKSEADPLKRVPFEKPPFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHTLPRPLSFLAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGMKWYSKYLNNPLGRVLTLVITLTLGWPLYLAFNVSGRPYERFACHYDPYGPIYTDRERMQIYISDAGVLAVCYGLFHLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLISTMPHYHAMEATKAIKPILGEYYRLDETPFVKAMWREARECIYVEPDHGTEHKGVFWYKNKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1478 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Pvu1g1478 383 CDD Delta12-FADS-like 47 329 - -
Pvu1g1478 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Pvu1g1478 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Pvu1g1478 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1478 Pvu-Chr1 39136762 39142808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1478 1 383 Lipid Metabolism Gene Families AT3G12120 75.979 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1478 K10256 - gmx:547815 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1478 1 39136762 39142808 Pvu1g1478 1 39136762 39142808 ECH
Pvu1g1478 1 39136762 39142808 Pvu7g2672 7 49753576 49756264 PCT