Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2580 ATGGTGGGAAGCATCATGGAAGTAGTTTGTAATGAATACTCAAATGGCTCTGTTCAGGCCTGCAATGGTTCAGAGGAGAAGCTTGATGATCTTCGCAGCCTTGTTGGGAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGTGCTGGTGCCTGGGGCAGTGTTTTTGCTGCTTTGTTGCAAGATACTTTTGGCCAATTCCGCGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGGAAGACACTTGATAGAGCAACAGCAAAGCACCTCTTTGAAGTTATCAACTCCAGGGAGGATGTATTGAGAAGGTTGATCAGACGTTGTGCTTATCTGAAATATGTTGAGGCCAGGCTTGGTGATAGGACTCTTTTAGCTGATGAGATTCTGAAAGATGGATTTTGTTTGAACATGATAGATACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACTGAAACAAGGGAAATTTTTGAAGAGATAAGTAAATATTGGAAGGAGAGAATCACAGTGCCTGTGATAATCTCTCTGGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATTTACAACAAGGAGTATGCCAATGCTCGAATATGTGGAGCTGATAAATGGAGGAAACCTCTAGCCAAGTTCCTACGACAACCACATTTTATTGTCTGGGATAACAGTGACCTTGTCACACATGAAGTCATGGGGGGCTTGAAAAATGTCTATGCAATTGGTGCAGGTATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATATTCATCACTCACTTGTTGGCTGAAGGACCTGAGAAACTTGCAGGGCCATTATTGGCTGACACTTATGTCACTTTGCTAAAAGGTCGTAATGCATGGTATGGCCAGATGCTAGCTAAAGGCGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTCTCAGCAGTGGAGGCCTTTTTTGAACTTTTAAGCCATTCAAGCCTGAATGTGTTGCACCCAGAAGAACACAAGCCGGTTGCTCCTGTTGAACTTTGCCCCATCCTCAAGACACTCTATAAAATATTGATATCAAGGTAA 1272 0.4355 MVGSIMEVVCNEYSNGSVQACNGSEEKLDDLRSLVGKADGDPLRIVSVGAGAWGSVFAALLQDTFGQFRDKVQIRIWRRPGKTLDRATAKHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGADKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEGPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSHSSLNVLHPEEHKPVAPVELCPILKTLYKILISR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2580 423 Gene3D - 25 106 - -
Pvu7g2580 423 Gene3D - 275 423 IPR013328 GO:0016491
Pvu7g2580 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 275 IPR036291 -
Pvu7g2580 423 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 421 IPR006109 GO:0004367|GO:0005975
Pvu7g2580 423 Gene3D - 135 271 - -
Pvu7g2580 423 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 422 - -
Pvu7g2580 423 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 421 IPR008927 -
Pvu7g2580 423 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 249 IPR011128 GO:0016616|GO:0046168|GO:0051287
Pvu7g2580 423 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0004367|GO:0006072|GO:0009331
Pvu7g2580 423 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0004367|GO:0006072|GO:0009331
Pvu7g2580 423 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2580 Pvu-Chr7 48945747 48951463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2580 1 423 Acyl Lipid Metabolism Gene Families AT2G41540 85.613 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2580 K00006 - gmx:100797552 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2580 7 48945747 48951463 Pvu7g2580 7 48945747 48951463 ECH
Pvu1g1342 1 36706878 36711411 Pvu7g2580 7 48945747 48951463 PCT