Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1342 ATGGGAGTGGTTCATAATGCATACTCAAATGGAAGTGTTGGTGGTCAGAATTGTAATGGGGTGGAGGAGAAGCTTGATGATTTGAGGAGGCTCATTGGGAAAGCTGATGGTGATCCTCTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTACAAGACACTTATGGGCAATTCAGGGACAAGATACAGATCAGGATATGGAGAAGAGCAGGAAGGGCAGTGGATAGAGGCACTGCTGAACATCTCTTTGAGGTCATCAACTCAAGGGAAGATGTGTTGAGGAGGTTGATCAGGCGTTGTGCATATCTGAAATATGTGGAGGCAAGGCTTGGTGACAGGACCCTCTTTGCTGATGAAATTCTCAAAGATGGTTTTTGCTTGAACATGATTGATACCCCACTTTGTCCTTTGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTCAATGGTTTGCCTTCTACAGAAACACGTGAGATCTTTGAAGAGATTAGTAAGTATTGGAACGAGAGAATCACAGTGCCTATAATTATCTCTTTGTCAAAGGGTATAGAGGCTGCATTGGACCCTCTGCCACATATTATTACTCCCACAAAGATGATTAACCAAGCAACTAGAGTGCCAATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCAAGAATATGTGGAGCCGAGAAATGGAGAAAACATCTGGCCAAGTTTTTACGACAGCCACAATTTATTGTCTGGGATAACAGTGACCTTGTCACACATGAGGTCATGGGTGGTTTGAAAAACGTCTATGCAATTGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCCACAAGCAAATCTGTGTACTTTGCACACTGCACATCAGAAATGATATTCATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGCCCCTTACTGGCTGACACTTATGTAACCTTGTTGAAAGGCCGTAACGCTTGGTATGGTCAAATGTTGGCTAAGGGTCAATTAAGACCAGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAAGCATTCTTTGAACTTCTGAGCCAATCTAGCCTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTGGAGCTTTGTCCCATCTTGAAGACACTCTACAAAATTTTGATATCAAGGGAACAATCATCACAAGCTATTCTAAAAGCATTGAGGGATGAAAATTTGAATGATCCTCGCGAACGAATTGAGATTGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGACAGTCCTGA 1383 0.4382 MGVVHNAYSNGSVGGQNCNGVEEKLDDLRRLIGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWNERITVPIIISLSKGIEAALDPLPHIITPTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYKPSLLGQS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1342 460 Gene3D - 134 268 - -
Pvu1g1342 460 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 272 IPR036291 -
Pvu1g1342 460 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 272 427 IPR008927 -
Pvu1g1342 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 272 426 IPR006109 GO:0004367|GO:0005975
Pvu1g1342 460 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 8 459 - -
Pvu1g1342 460 Gene3D - 22 103 - -
Pvu1g1342 460 Gene3D - 272 432 IPR013328 GO:0016491
Pvu1g1342 460 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 8 459 - -
Pvu1g1342 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 144 246 IPR011128 GO:0016616|GO:0046168|GO:0051287
Pvu1g1342 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 44 61 IPR006168 GO:0004367|GO:0006072|GO:0009331
Pvu1g1342 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 265 289 IPR006168 GO:0004367|GO:0006072|GO:0009331
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1342 Pvu-Chr1 36706878 36711411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1342 9 459 Acyl Lipid Metabolism Gene Families AT2G41540 87.805 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1342 K00006 - gmx:100781512 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1342 1 36706878 36711411 Pvu1g1342 1 36706878 36711411 ECH
Pvu1g1342 1 36706878 36711411 Pvu7g2580 7 48945747 48951463 PCT