Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2557 ATGGATCATATAAGCAACGAGGCTAGTTTTGTCCCTTTTGCGATTGGCCCTTCTAGCATTCTGGGCAGGACTATTGCTTTCAGGGTTCTGTGCTGCAAGTCTATCTTAAAATTGAGACATCAGATTCGTTTTGTGTTGTTGGATATCTTACATGGTTTTAGGGAATTTTGGGGACCCATTTTGTCATGGTTGCACCCAAGAAATCCGCAGGGGATATTGGCAATGATGACTATAGTTGCTTTCTTGTTGAAACGGTACACCAATGTGAAGGTGAGGGCTGAGATGGTATATAGGCGGAAATTTTGGAGAAATATGATGAGATCTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAAATGCTTGATAGAGAGACACCAAAGATGAATGAATCTCACCTTTATGATGTGGAGCTGGTGAGTAACAAGCTTGAAGAGCTTCGCCATCGCCGGCAAGAGGGGTCTCTTAGGGATATAATATTTTGTATGCGTGCAGATCTTGTTAGAGATCTTGGTAATATGTGTAACCCTGAACTCCACAAAGGTAGGCTTCAAATGCCAAGACTAATCAAGGAGTATATTGACGAGGTATCAACTCAGTTGAGAATGGTTTGCAACTCTGATTCGGAGGAGCTTCCATTGGAAGAAAAACTTTCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACTGCTTTGTTGTTAAGTGGGGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTGGTTAAAACACTGGTAGAACATAAACTTATGCCGAGGATAATTGCTGGTTCAAGTGTAGGATCCATCATGTGCTCCATTGTTGCCACTAGGGCTTGGCCTGAGCTTCGAAGCTTTTTTGAGGATTCATTGCAATCATTACAGTTTTTTGATCAATTAGGTGGGATTTTTACAGTTGTGAAGAGGGTCACAACATATGGTGCAGTTCACGAGATCAGACATTTGCAAATGATGCTGAGGAATCTAACAAGCAATCTTACATTTCAAGAAGCATATGATATGACGGGTCGAGTTCTTGGGATTACAGTTTGTTCCCCAAGAAAGCATGAACCACCTAGATGTCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTCGAGGCTCAGGAATTAATGGCAAAGGATAGAAGTGGAGATATTGTTCCTTACCATCCTCCTTTTAACTTGGGTCCTGAAAAGGGTTCCACTCCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATGGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAACGTCAACCATTTTATAGTTAGTCAGGCCAATCCTCATATTGCACCATTGTTGAGATTGAAAGAATTTATACGAGCTTATGGAGGAAATTTTGCAGCAAAGCTTGCTCATCTAGTGGAGATGGAGGTGAAACATAGATGTGATCAAGTACTGGAGCTCGGCTTTCCATTAGGTGGACTTGCCAAACTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCTGTCTCAGTACTTAAAAATCATACAGAACCCTTCTTATGTAGAACTTCAAAAGGCAGCTAACCAAGGGAGAAGAGGCACTTGGGAGAAGCTTTCTGCCATAAAAGCAAACTGTGGAATTGAGCTTGCTCTTGATGAGTCTGTTGCAATTCTGAATCATATGAGGCGTCTCAAAAGAAGTGCCGAGAGAGCTGCTGCTGCTGCTTCTCATGGTCTGCCCACTATAGGCAAATTCAGTGGTCCAAGAAGAATTCCCTCGTGGAATGTCATTGCTCGAGAGAATTCTACAGGATCCCTAGAAGACCTTCATGCAGATGCTGCTTCCTCATTGCATCAAGGTCTTAATAGTCCCAGTGGAGCCACTGGTAAAAATTGGAAGTCCCATCGTAGCATTCATGAGGCAAGTGACAGTGAATCTGAAAGTGCTGACTTGAATTCTTGGACCAGATCCGGTGGGCCTTTGATGAGAACTACATCAGCAGATATGTTCATTGACTTTGTTGAAAACTTAGAAGTTGATACTGAACTAAATAATGTGACACAGACTAGCCCTCATGATTTTCAGCATCACAGTTCAAGGAACACAACTCCTGATAAGTGCTCCGAGAGCACAGATCAGAAAGAAAATGGCAACAGGGTTGTCATGAATGGATCTAACATAATGGTATCTGAAGGTGATCTTTTGCAGCCTGGAATGATCCATAATGGGATTGTATTTAATGTTGTCAAGAAAGAAGACTTGACACCTTCAAATAGGAATCATGATTATAATAGTTGTAACAATGCAGTGGTTGAATGTGTACAAATTGACTTTCCAGAGAAGGAGATGGATGCTTCTAGCTCAACTTCTGAAAATGGTGATGAGGAATCAACAATGTTCAGTTCTTCAACTGATTTGGTTAAGGATCAAAGCATTGCTGACAGTTAA 2481 0.4228 MDHISNEASFVPFAIGPSSILGRTIAFRVLCCKSILKLRHQIRFVLLDILHGFREFWGPILSWLHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMVYRRKFWRNMMRSALTYEEWAHAAKMLDRETPKMNESHLYDVELVSNKLEELRHRRQEGSLRDIIFCMRADLVRDLGNMCNPELHKGRLQMPRLIKEYIDEVSTQLRMVCNSDSEELPLEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLMPRIIAGSSVGSIMCSIVATRAWPELRSFFEDSLQSLQFFDQLGGIFTVVKRVTTYGAVHEIRHLQMMLRNLTSNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGDIVPYHPPFNLGPEKGSTPVRRWRDGSLEMDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFIRAYGGNFAAKLAHLVEMEVKHRCDQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLSQYLKIIQNPSYVELQKAANQGRRGTWEKLSAIKANCGIELALDESVAILNHMRRLKRSAERAAAAASHGLPTIGKFSGPRRIPSWNVIARENSTGSLEDLHADAASSLHQGLNSPSGATGKNWKSHRSIHEASDSESESADLNSWTRSGGPLMRTTSADMFIDFVENLEVDTELNNVTQTSPHDFQHHSSRNTTPDKCSESTDQKENGNRVVMNGSNIMVSEGDLLQPGMIHNGIVFNVVKKEDLTPSNRNHDYNSCNNAVVECVQIDFPEKEMDASSSTSENGDEESTMFSSSTDLVKDQSIADS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2557 826 MobiDBLite consensus disorder prediction 627 643 - -
Pvu7g2557 826 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Pvu7g2557 826 MobiDBLite consensus disorder prediction 709 724 - -
Pvu7g2557 826 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 714 - -
Pvu7g2557 826 Pfam Patatin-like phospholipase 233 431 IPR002641 GO:0006629
Pvu7g2557 826 MobiDBLite consensus disorder prediction 699 729 - -
Pvu7g2557 826 MobiDBLite consensus disorder prediction 792 826 - -
Pvu7g2557 826 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
Pvu7g2557 826 CDD Pat_SDP1-like 163 570 - -
Pvu7g2557 826 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 714 - -
Pvu7g2557 826 Gene3D Cytosolic phospholipase A2 catalytic domain 230 313 - -
Pvu7g2557 826 Gene3D Cytosolic phospholipase A2 catalytic domain 314 492 - -
Pvu7g2557 826 MobiDBLite consensus disorder prediction 793 826 - -
Pvu7g2557 826 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Pvu7g2557 826 MobiDBLite consensus disorder prediction 626 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2557 Pvu-Chr7 48776150 48779986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2557 4 798 Acyl Lipid Metabolism Gene Families AT5G04040 73.292 0.0 1193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2557 K14674 - gmx:100807526 1402.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2557 7 48776150 48779986 Pvu7g2557 7 48776150 48779986 ECH
Pvu1g1317 1 35879520 35883977 Pvu7g2557 7 48776150 48779986 PCT