Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1317 ATGGATCACATTAGTAATGAGGCTAGGGTTTACGGTTTTCCAATCGGTCCTTCAGACATTCTTGGTAGATCAATTGCTTTCAGGGTTCTATTTTGTAAGTCCATGTCACACTTTAAGCACCAGATATTTCACGTGTTGTTAGATCTCTTCTATAGGTTTAGGGGGGGTTTGGCATCCTTTATATCATGGTTGCATCCTAGGAATCCTCAGGGGATACTGGCAATGATGACAATTATTGCTTTCTTGTTGAAACGATATACAAATGTGAAAGTAAGGGCTGAAATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTCCGCCACCGTCGGCAAGAGGGATCTCTTAGAGATATATTTTTTTGTATGCGTGCCGATCTTGTTAGAAATTTAGGTAATATGTGTAATCCTGAACTACACAAGGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAATACATTGATGAAGTAACGACTCAATTGAGAATGGTCTGTGATTCTGATTCAGAGGAACTATCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACAGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTGGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGCGTGGGATCTATTATGTGTGCCGTTGTTGCCACCAGGACTTGGCCTGAGCTTCAGAGCTTTTTTGAAGATTCATGGCACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTTAAGAGAGTCACGACATTTGGTGCTGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAATTCTTGGGATTACAGTTTGTTCCCCAAGGAAGCACGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTGGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAAGAATTGATGGCAAAGGATAGAAGTGGGGAAATTATTCCTTACCATCCTCCTTTTAACTTAGGTCCCGAAGAGGGCTCCACACCAGCGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAACTATTCAATGTCAATCATTTTATAGTTAGCCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAATTTGTGCGGACTTACGGGGGCAACTTTGCTGCCAAGCTTGCCCATCTTGTGGAGATGGAGGTGAAACATAGGTGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATGCCTGCAACTCTTGCTCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGTACCTGGGAGAAACTTTCAGCCATTAAAGCAAATTGTGGCATTGAGCTTGCCCTTGATGAGTGTGTTGTGATTCTCAATCATATGAGAAGACTAAGGAGAATGGCTGAGAGAGCTGCTTCTGCTTCTCATGGTTTGTCAAGTACTGTCAGGTTTAGTGCTTCAAGAAGAATTCCTTCATGGAATTGCATTGCACGGGAGAATTCGACCGGTTCCCTTGAGGACCTTATTGATGTTGCTTCCTCATTGCACCAAAGCATTAGCAGTTCTAATGTGGCCAGTGGTAAAACTTGGAAGACCCACCGTGGCATACACGAAGGAAGTGACAGTGACTCTGAAAGTGTTGATTTGCACTCTTGGACAAGATCTGGTGGGCCTTTGATGAGAACTACTTCGGCAAATATGTTCATTGATTTTCTCCAAAACTTGGAAGTTGACACTGAACCAAATAAAGGCTTAGTGAGTCATGCTAACCCTAATGATTTTCAGTATCGTAACCCCAGGCTCACAACACTGGATAGGAACTCCGATAGCACAGAATCTGAGCAAAGGGAAATTGGCAACAGGGTGGTCAATGGGTCCCGCATACTGGTGACTGCAGGTGATTTTTTGCAGCCGGAAATGATCCATAATGGTATTGTGTTTAATGTTGTCAAGAAAGAAGACGTGACACCCTTAAACAGGAGTCATGATTTTGAAAATTTCACCAATGAGATTGCTGAATGTGTTCAAGATGAGTGTCCAGGGAAGGAGATGGATGCTGCTAGCTCAGCCTCTGAACATGGAGATGATGAATCCACTCCAGCTACGTCCTTTACTGCATCTCCAGATTATACTTCTGTGGACCGTCATTCGGGCACAGATTCAAGTATGAATGGGAGCATTGTTGATGGCTAG 2526 0.4299 MDHISNEARVYGFPIGPSDILGRSIAFRVLFCKSMSHFKHQIFHVLLDLFYRFRGGLASFISWLHPRNPQGILAMMTIIAFLLKRYTNVKVRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDKETTKMNESDLYDVELVRNKLQELRHRRQEGSLRDIFFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVVILNHMRRLRRMAERAASASHGLSSTVRFSASRRIPSWNCIARENSTGSLEDLIDVASSLHQSISSSNVASGKTWKTHRGIHEGSDSDSESVDLHSWTRSGGPLMRTTSANMFIDFLQNLEVDTEPNKGLVSHANPNDFQYRNPRLTTLDRNSDSTESEQREIGNRVVNGSRILVTAGDFLQPEMIHNGIVFNVVKKEDVTPLNRSHDFENFTNEIAECVQDECPGKEMDAASSASEHGDDESTPATSFTASPDYTSVDRHSGTDSSMNGSIVDG* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1317 841 MobiDBLite consensus disorder prediction 698 728 - -
Pvu1g1317 841 MobiDBLite consensus disorder prediction 791 841 - -
Pvu1g1317 841 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Pvu1g1317 841 MobiDBLite consensus disorder prediction 641 660 - -
Pvu1g1317 841 MobiDBLite consensus disorder prediction 642 659 - -
Pvu1g1317 841 Gene3D Cytosolic phospholipase A2 catalytic domain 310 496 - -
Pvu1g1317 841 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 714 - -
Pvu1g1317 841 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 714 - -
Pvu1g1317 841 CDD Pat_SDP1-like 163 570 - -
Pvu1g1317 841 MobiDBLite consensus disorder prediction 804 841 - -
Pvu1g1317 841 MobiDBLite consensus disorder prediction 698 717 - -
Pvu1g1317 841 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
Pvu1g1317 841 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Pvu1g1317 841 Gene3D Cytosolic phospholipase A2 catalytic domain 229 309 - -
Pvu1g1317 841 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1317 Pvu-Chr1 35879520 35883977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1317 4 841 Acyl Lipid Metabolism Gene Families AT5G04040 71.412 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1317 K14674 - gmx:100791261 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1317 1 35879520 35883977 Pvu1g1317 1 35879520 35883977 ECH
Pvu1g1317 1 35879520 35883977 Pvu7g2557 7 48776150 48779986 PCT