Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2520 ATGGAGAAGAATAGTAAACTAGATCCTCCTATCTCCCTACTGGATTTGCCTAAATCCACCTTGGATTTCATTCTCAAGTACCTTTCTCCAATAGACCTTTGCACAATGTCAATGGTGTGTGTTTTCTTGAAGGGTAAATGCCAAAGTGATAACTTATGGGAAAATCACATAAAAGAGAAATGGGGTAGAGTGATTGGTGATGTGGTTTACAAGGAGTGGGAGTGGCACATAGGAATGGCCAAAGATGGAGTTTTTTTGAAGAATGAACAGAATAATCAAAGTGGGTCAATGGGTTCTTTTAGTGGTGTTTGGCCTAACCTATATCTTGGTTCATACTTGGAAGATTGCAAGGTTCTGAATGGTCAACAATCAAACAACTTCATGATGTCTTTGTATTTCTCTCTGGAGAGTGGTAGCTTTTGGTTTCCTGCCCAGGTCTACAAGGGATTGGTGATTCACGATGCATTGGTTAACTATGACTCACAATCTAATACCTTTCAAGCAAGGTATCAAAATGGAGGTTGGAGTTGCCTAGGGAGGAACATTGAGTGGGATATGGTGAGAGCTCCCTTAGTTGACACTCCTCCATATCTTGTGCATCTTTCTCATTTTTCAGACAATTTGAAACCAGATGATCATATTGAGATTCAATGGAGATCAAATACTGAATGTCCTTATGAATGGTGGTATGCTATTATTGGTCACTTGGACTCATGTAATCACAAATCTTGTCAGTGTCAGTACAATGATGACACCTGTCTTATATATGCCTCCAGTGGAAGAACAAGTCTAAATTCGATATTTGCCCCAAACTAA 816 0.3946 MEKNSKLDPPISLLDLPKSTLDFILKYLSPIDLCTMSMVCVFLKGKCQSDNLWENHIKEKWGRVIGDVVYKEWEWHIGMAKDGVFLKNEQNNQSGSMGSFSGVWPNLYLGSYLEDCKVLNGQQSNNFMMSLYFSLESGSFWFPAQVYKGLVIHDALVNYDSQSNTFQARYQNGGWSCLGRNIEWDMVRAPLVDTPPYLVHLSHFSDNLKPDDHIEIQWRSNTECPYEWWYAIIGHLDSCNHKSCQCQYNDDTCLIYASSGRTSLNSIFAPN* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2520 271 ProSiteProfiles F-box domain profile. 10 56 IPR001810 GO:0005515
Pvu7g2520 271 PANTHER ESTS AU081301(E20138) 11 252 - -
Pvu7g2520 271 Gene3D - 3 93 - -
Pvu7g2520 271 PANTHER CYCLIN-LIKE F-BOX 11 252 - -
Pvu7g2520 271 SMART fbox_2 16 56 IPR001810 GO:0005515
Pvu7g2520 271 SUPERFAMILY F-box domain 4 64 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2520 Pvu-Chr7 48445332 48448728 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2520 - - pvu:PHAVU_007G244800g 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2520 7 48445332 48448728 Pvu7g2520 7 48445332 48448728 ECH
Pvu1g1267 1 34393345 34396095 Pvu7g2520 7 48445332 48448728 PCT