Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1267 ATGCTTTACTTTCTTATATCTTTTGTCTCGTTTCTAATCCTTTCCAAGTCCTTTACCAGTAAGCCTCTCTCGTCAAGGGAGAGTGGGACCAAAATAGGGTCAATTGGGTTTTGGGGGAGCCTTTCAAGTTGGCTAGTTTCTAGTCTCAGAAAAGGAAGCACAAGCACTCCTTGTAGCTTTTTTCGGTTTTCTCTTCTCATGTCATTCAAAAATAACAGTTTAGTGTCTAAGGAGGAGAATGAGGAAGAGGAGGGGAAGGTTTCTCTCTTGGATTTGCCTGATTTACCATTGGAGTGTATCCTTGGGCACCTTTCACCTGCTGAATTATGTAGCGTGGCAACAGTGTGCACATATCTTAGGGATACAAGTAGAAGTGATCATTTATGGAAGAAACACATGGAGAGGAAATGGGGCAAAGTGTTTGGTGATGCTGCTTGTAGACAATGGAAATGTCATGTAGCTTCCAAGACCAGAGAGAAGATCTCCAACCAGCAAAATCAGAAAGGAATATTTGCTTTCCTTCATGGTGATTTTCGCCCCCTGGTTTGGATCAAAGCAAAATCAGAAAAGGGAACACAGTCAAGCAGCTCATTCCCGGAAGATTCAGTCATGGCTCTGTATCTTTCTCTTGAGAGTGGCAAATTTTGGTTCCCAGCTCAAGTCTATAACCGTGAGAACGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGACTCTCGATCTGACACTTTTCAGGCAAGGTACTCACCTCATGGGAGATGGACAACTGAGGAAAACATACAATGGGACCGACTCAGAGTGCCACCAATTGCCTCTTCTCCACATGCTCTTCACATCTCTGACTCTTTGGATAACTTGAGACCTGGAGATCACATTGAGATCCAGTGGAGAAGAAACAAAGACTTCCCTTATGGTTGGTGGTATGGTGTAATTGGTCATTTGGAACAATGTCAAGGGCATGGGAACCATTGCCTTTGTCACAATAATGATATGGTGATTTTGGAGTTCACACAATACACTGCTGGATCCAGATGGAGACAAACCATGATAGATAGGAAGCATCATATAGAAAAAGGCAATGAAATAGATGGTTTTTATGGAGGAATCAGGAAGCTGCATAGCAGGGAAGAAATTACAAGGTGGAAGAAACTGTGGCCAACCAAAACTGTGGTACATGATTGA 1197 0.4302 MLYFLISFVSFLILSKSFTSKPLSSRESGTKIGSIGFWGSLSSWLVSSLRKGSTSTPCSFFRFSLLMSFKNNSLVSKEENEEEEGKVSLLDLPDLPLECILGHLSPAELCSVATVCTYLRDTSRSDHLWKKHMERKWGKVFGDAACRQWKCHVASKTREKISNQQNQKGIFAFLHGDFRPLVWIKAKSEKGTQSSSSFPEDSVMALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFQARYSPHGRWTTEENIQWDRLRVPPIASSPHALHISDSLDNLRPGDHIEIQWRRNKDFPYGWWYGVIGHLEQCQGHGNHCLCHNNDMVILEFTQYTAGSRWRQTMIDRKHHIEKGNEIDGFYGGIRKLHSREEITRWKKLWPTKTVVHD* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1267 398 Gene3D - 74 165 - -
Pvu1g1267 398 PANTHER ESTS AU081301(E20138) 1 394 - -
Pvu1g1267 398 SMART fbox_2 92 132 IPR001810 GO:0005515
Pvu1g1267 398 ProSiteProfiles F-box domain profile. 86 132 IPR001810 GO:0005515
Pvu1g1267 398 PANTHER F-BOX-LIKE PROTEIN 1 394 - -
Pvu1g1267 398 SUPERFAMILY F-box domain 78 140 IPR036047 GO:0005515
Pvu1g1267 398 Pfam F-box domain 89 131 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1267 Pvu-Chr1 34393345 34396095 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1267 - - gmx:100778469 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1267 1 34393345 34396095 Pvu1g1267 1 34393345 34396095 ECH
Pvu1g1267 1 34393345 34396095 Pvu7g2520 7 48445332 48448728 PCT