Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2323 ATGTCCGCTAGATTTCGGGGATCAGAAGAACACCAACATGGTTCTTCTTCCACCACCCACAGAAACAACACTTCACATCATCCCCCTCCCCAAGCTGCTGGAATTGTTGCTACTTTGAAGGATAAAAGTGTTGATGAGTTGCGGGAGCTTTTATCCAACAAAGAGGCATATCAGCAGTTTTTGCATTCACTTGAGGAGGTCAAGATTCAAAATAATGTGAATGATGAACTTTGCAAGGAGAATCTGCAGCTTGCTGACGAAAATCTACGAAAAGAACCTCGCATTGTGGAACTCAGGAACCAGCATAGAATAATTTGTACGACTGAGTTAGCTGCTGCTCAAGAGAAACTAAATGAGCTTTACAGGCAGAAAGAGAAAATGACAAAGTTGGATTCCCCACTCTATCTTCTCCAAAGGATTCAAGAGGCTATGAATAAGACAGATGAGGAATCTGAAAATCTGCACCATCAAGTCCTTGACAGAGAGATTGACCTTGGAGCATTTATGCAGAAATACAAAAAGCTACGTACCGCTTACCACAGGAAAAGTCTAATAAATCTTGCAGCTAAGACATCAAATATACGAGCATCGCATTCGGAAATCAAGAATTAG 612 0.4134 MSARFRGSEEHQHGSSSTTHRNNTSHHPPPQAAGIVATLKDKSVDELRELLSNKEAYQQFLHSLEEVKIQNNVNDELCKENLQLADENLRKEPRIVELRNQHRIICTTELAAAQEKLNELYRQKEKMTKLDSPLYLLQRIQEAMNKTDEESENLHHQVLDREIDLGAFMQKYKKLRTAYHRKSLINLAAKTSNIRASHSEIKN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2323 203 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 22 194 - -
Pvu7g2323 203 Pfam Modifier of rudimentary (Mod(r)) protein 40 184 IPR009851 -
Pvu7g2323 203 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 22 194 - -
Pvu7g2323 203 Coils Coil 110 130 - -
Pvu7g2323 203 ProSiteProfiles VPS37 C-terminal domain profile. 114 197 IPR009851 -
Pvu7g2323 203 MobiDBLite consensus disorder prediction 1 16 - -
Pvu7g2323 203 MobiDBLite consensus disorder prediction 1 32 - -
Pvu7g2323 203 SUPERFAMILY Endosomal sorting complex assembly domain 135 182 IPR037202 -
Pvu7g2323 203 Gene3D Helix hairpin bin 122 190 IPR029012 -
Pvu7g2323 203 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2323 Pvu-Chr7 46570488 46573453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2323 K12185 - gmx:100797771 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2323 7 46570488 46573453 Pvu7g2323 7 46570488 46573453 ECH
Pvu1g1901 1 44841704 44847180 Pvu7g2323 7 46570488 46573453 PCT