Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1901 ATGTTCAGATTCTGGGGATCACAAGACCAACAATCACAGGATGGTTCTTCGCAGTCACAGTCGTGGTATCCCCCATCAGTGGTAAGTTCACCAAGTTCGTCAAGGCCTGTTACACCATCTGGATCTTCTTCTTCATTATCGCATAGGCCTTCTTCTCATGTTCCGCCCTCGGAAGCTGCTGGAGTTATTGCCGTTTTGAAGGACAAGAGCGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCATATCAGCAGTTTCTACATTCGCTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAAGAAAATCTTCAAAAGGAACCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTAGCTGCGGCAAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGTTGAAACTGAATTCGCCAGCATCCCTTATCCAGAGGATTCAAGAGTCTGTGAATAAGACTGAAGAGGAATCTGACAATCTACACCAGCATTTCCTTGACAGAGAGATTGATCTTGCGGCTTTCTTGCAAAAGTACAAGAAGCTACGTACAACTAACCACAAAAAGACTCTCATACATCTTGCTGCTAAAACATCAACAGTATGA 666 0.4204 MFRFWGSQDQQSQDGSSQSQSWYPPSVVSSPSSSRPVTPSGSSSSLSHRPSSHVPPSEAAGVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPASLIQRIQESVNKTEEESDNLHQHFLDREIDLAAFLQKYKKLRTTNHKKTLIHLAAKTSTV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1901 221 MobiDBLite consensus disorder prediction 1 56 - -
Pvu1g1901 221 Gene3D Helix hairpin bin 143 214 IPR029012 -
Pvu1g1901 221 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 221 - -
Pvu1g1901 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Pvu1g1901 221 Coils Coil 164 184 - -
Pvu1g1901 221 MobiDBLite consensus disorder prediction 1 52 - -
Pvu1g1901 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 210 IPR009851 -
Pvu1g1901 221 SUPERFAMILY Endosomal sorting complex assembly domain 159 208 IPR037202 -
Pvu1g1901 221 Coils Coil 130 157 - -
Pvu1g1901 221 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1901 Pvu-Chr1 44841704 44847180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1901 K12185 - gmx:100305851 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1901 1 44841704 44847180 Pvu1g1901 1 44841704 44847180 ECH
Pvu1g1901 1 44841704 44847180 Pvu7g2323 7 46570488 46573453 PCT