Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2321 ATGCGGTGTTGCATTCCTACGCTGTTGGCGGTGACCGCCGTGCTGGTGTCGGCGGTGCACGCCGCTTTCCTCCCTCTGGAGCGGAGCATTCCTCTGAGCCACCGCGAGGAGGTGGCAGCGCTGAGGGCTCGCGACAGAGCCCGCCACGCCCGAATGTTGAGCGGCATAGTCGACTTAGCAGTTCAAGGAACCTCCGATCCAAACTCCGTTGGGTTGTATTATACCAAAGTGAAGATGGGAACACCTCCTAAAGAATTTAACGTGCAGATTGATACGGGGAGTGATATATTGTGGGTGAATTGTAATACTTGCAGTAATTGTCCTCAGTCTAGTGAACTAGGGATTGAGCTTAATTTCTTTGACACGGTTGGGTCGTCCACCGCTGCGTTGGTTCCCTGCTCGGACCCGATATGCACTACTGGCGTTCAAGGTGCTTCTGCTGAGTGCTCCACGAGGGTAAATCAATGCAGCTACGCCTTTAAGTATGGAGATGGGAGTGGGACTTCAGGTTATTATGTTTCGGATGCATTGTATTTTAACTTGATCGTGGGACAGCCTCCACTTCCACCGGTTAACTCTTCGGCTACCATTGTTTTTGGGTGTAGTATCTCTCAGTCTGGAGATCTGACTAAGGCAGATAAAGCAGTTGATGGCATTTTTGGGTTTGGCCCTGGTGCTCTTTCTGTTGTATCGCAGTTGTCATCACGAGGACTAACACCCAAAGTCTTCTCTCATTGCTTAAAAGGAGATGGTGATGGAGGAGGCATTCTAGTTCTTGGCGAGATAAAGGAGTCAAGTATTGTTTATAGTCCACTTGTTCCATCACAGCCTCATTACAACTTGAATCTTCAGAGTATTGCTGTCAATGGGCAACTCCTCCCAATTAATCCAGCTGTATTTGCAACATCTAATGACCGAGGAACTATAGTTGACTGTGGTACAACATTGGCATATCTTGTTCAGGAAGCTTATGATCCTCTTGTCACTGCAATAACTACTGCTGTGTCACAATCCGCGCAGCAAATTAATTCCAAAGGAAACCAGTGTTATCTGGTCTCAACCAGTATAGGTGACATTTTTCCTTCAGTCAGTTTAAATTTTGAGGGTGGAGCGTCAATGGTTTTAAAACCAGAGCAGTACCTTATGCATAATGGTTACCGTGATGGTGCTGAAATGTGGTGCATCGGTTTCCAGAATGTACAGGAGGGAGTCTCAATTTTAGGAGATCTTGTCCTAAAAGATAAAATAGTTGTGTATGACTTGGCACATCAACGAATTGGATGGGCTAACTATGACTGTTCTTTGTCTGTAAATGTGTCTGTGACTACGAACAAGGATGAATACATCAACGGGGGACAGCTGAGTGTCAGCAGCTCCGCAATACGTGTTCTCTGTAATTTACTACCATTAAGCATTGTGGCTCTCTCTTTGTACATAATGTTAGTATGA 1449 0.461 MRCCIPTLLAVTAVLVSAVHAAFLPLERSIPLSHREEVAALRARDRARHARMLSGIVDLAVQGTSDPNSVGLYYTKVKMGTPPKEFNVQIDTGSDILWVNCNTCSNCPQSSELGIELNFFDTVGSSTAALVPCSDPICTTGVQGASAECSTRVNQCSYAFKYGDGSGTSGYYVSDALYFNLIVGQPPLPPVNSSATIVFGCSISQSGDLTKADKAVDGIFGFGPGALSVVSQLSSRGLTPKVFSHCLKGDGDGGGILVLGEIKESSIVYSPLVPSQPHYNLNLQSIAVNGQLLPINPAVFATSNDRGTIVDCGTTLAYLVQEAYDPLVTAITTAVSQSAQQINSKGNQCYLVSTSIGDIFPSVSLNFEGGASMVLKPEQYLMHNGYRDGAEMWCIGFQNVQEGVSILGDLVLKDKIVVYDLAHQRIGWANYDCSLSVNVSVTTNKDEYINGGQLSVSSSAIRVLCNLLPLSIVALSLYIMLV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2321 482 Gene3D Acid Proteases 55 261 IPR021109 -
Pvu7g2321 482 CDD pepsin_A_like_plant 73 433 IPR034161 -
Pvu7g2321 482 PRINTS Pepsin (A1) aspartic protease family signature 79 99 IPR001461 GO:0004190|GO:0006508
Pvu7g2321 482 PRINTS Pepsin (A1) aspartic protease family signature 308 319 IPR001461 GO:0004190|GO:0006508
Pvu7g2321 482 PRINTS Pepsin (A1) aspartic protease family signature 405 420 IPR001461 GO:0004190|GO:0006508
Pvu7g2321 482 ProSiteProfiles Peptidase family A1 domain profile. 73 429 IPR033121 -
Pvu7g2321 482 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 451 - -
Pvu7g2321 482 Gene3D Acid Proteases 262 440 IPR021109 -
Pvu7g2321 482 PANTHER ASPARTYL PROTEASES 7 451 IPR001461 GO:0004190|GO:0006508
Pvu7g2321 482 SUPERFAMILY Acid proteases 70 436 IPR021109 -
Pvu7g2321 482 Pfam Xylanase inhibitor C-terminal 278 429 IPR032799 -
Pvu7g2321 482 Pfam Xylanase inhibitor N-terminal 73 260 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2321 Pvu-Chr7 46556014 46561163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2321 70 434 Miscellaneous Gene Families AT1G44130 28.165 4.90e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2321 - - gmx:100820394 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2321 7 46556014 46561163 Pvu7g2321 7 46556014 46561163 ECH
Pvu1g1904 1 44854383 44860645 Pvu7g2321 7 46556014 46561163 PCT