Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2309 ATGGGCGCGTCGCTGTCGAGCGTCGGCGCGAACGGTTCGACAATCGGTCCGGGCCTCGGCGACATTCCGGAGTGCTGCGTGGCGTGCGTGTTCCTCTACCTCACGCCGCCGGAGATTTGTAACCTCGCTCGCCTCAACCGCTCATTCCGCGGCGCCGCCTCCTCGGACTCAGTCTGGGAGTCCAAGCTGCCGCGCAACTACCAGGATCTGCTGGCTCTGGTCCCGCCAGAGCGCCACGGGAATCTCTCGAAGAAGGACATTTTCGCGCTCCTCTCACGACCCCTGCCGTTCGACCACGGCCACAAGGTGGGTGGTGCTCTCCAGGAAGTGTGGCTGGACAGGGTCACTGGAAGGGTTTGCATGTCGATTTCGGCGAGGGCGATGGCGATTACTGGAATTGAGGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACGGTGGCTTATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGAGAGGTGACGTTTCCATTTCCCGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGGTTTTCCAAAAGACTTGGACGGCGTGTTTGTAATTATGAACACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTGTCTACTTCAGATGGTCAGCAAGCATCATCTGAATGCTGTTTGGATGAAAGTGTGATTGATGATACATATGGAAATCATAAGCGAGGATACTGGATAGATTATAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAGCCCACAACTCATGTTAGATTTTCCATGAAACAGATTGATTGTACACATTCCAAAGGTGGCCTTTGTGTAGATTCTGTATTTATTATACCAAGTGATTTGAGAGAGCGCAAGAGAAAATGCATTTGA 900 0.5067 MGASLSSVGANGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRSFRGAASSDSVWESKLPRNYQDLLALVPPERHGNLSKKDIFALLSRPLPFDHGHKVGGALQEVWLDRVTGRVCMSISARAMAITGIEDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSECCLDESVIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTHVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRKCI* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2309 299 Pfam Phloem protein 2 119 288 IPR025886 -
Pvu7g2309 299 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Pvu7g2309 299 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 297 - -
Pvu7g2309 299 SUPERFAMILY F-box domain 17 89 IPR036047 GO:0005515
Pvu7g2309 299 SMART fbox_2 22 62 IPR001810 GO:0005515
Pvu7g2309 299 PANTHER F-BOX PROTEIN PP2-A15 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2309 Pvu-Chr7 46452067 46456176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2309 - - vra:106772440 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2309 7 46452067 46456176 Pvu7g2309 7 46452067 46456176 ECH
Pvu1g1916 1 45005441 45011092 Pvu7g2309 7 46452067 46456176 PCT