Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1916 ATGGGGGCCTCGCTGTCGAACCTAGGAACCAACGGTTCGGCCGCCGCTCTGGGCCTCGGCGACATCCCGGAGAGTTGCGTCGCCCGCGTTTTCCTCCACCTTACTCCGCCGGAGATATGCAACCTCGCGCGCCTCAATCGCTCTTTTCGCGGCGCTGCCTCCGCCGACACCGTCTGGCAAACGAAGCTTCCTAGCAACTACCAAGATCTGCTCGATTTGATGCCTCCCGAGAGGTACCGGAATCTCTCCAAGAAGGACATATTCGCGCTGCTCTCTCGGCCAGTGCCGTTCGACGACGGCAACAAGGAAGTGTGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAGGAATCTAGGTTCAAAAATGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGATCAGCTTCCCATTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCAAAGAGGCTTGGGCGACGGGTGCGCAATTATGAACATACCCATGGTTGGGATTTAAAACCAGTGAAATTTGAGTTGTCAACAATGGACGGTCAGCAAGCATCATTCGAGTGCTGCCTGGATGAAGCTGAACCTGATGATGCACACGGCAATCAAAAGTGCGGACATTGGGTAGATTACAAGGTGGGTGAGTTTACTGTCAGGGGATCAGAACCTACAACCAAAGTAAGATTCTCCATGAAACAGATTGACTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTGATTTGAGAGAGCGCACCAGAAGCGGCATTCTGAAATAA 888 0.5056 MGASLSNLGTNGSAAALGLGDIPESCVARVFLHLTPPEICNLARLNRSFRGAASADTVWQTKLPSNYQDLLDLMPPERYRNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFKNVAYLQQIWWFEVDGEISFPFPADIYTLSFRLHLGRFSKRLGRRVRNYEHTHGWDLKPVKFELSTMDGQQASFECCLDEAEPDDAHGNQKCGHWVDYKVGEFTVRGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERTRSGILK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1916 295 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 289 - -
Pvu1g1916 295 PANTHER F-BOX PROTEIN PP2-A15 1 289 - -
Pvu1g1916 295 SMART fbox_2 22 62 IPR001810 GO:0005515
Pvu1g1916 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Pvu1g1916 295 SUPERFAMILY F-box domain 17 88 IPR036047 GO:0005515
Pvu1g1916 295 Pfam Phloem protein 2 113 282 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1916 Pvu-Chr1 45005441 45011092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1916 - - gmx:100807328 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1916 1 45005441 45011092 Pvu1g1916 1 45005441 45011092 ECH
Pvu1g1916 1 45005441 45011092 Pvu7g2309 7 46452067 46456176 PCT