Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2253 ATGGGAGAGCAAAAGGAGCAGCCAAAGAATGAAACAGAGAAGAAGCCCGAGGATGGAGCACCCAAGAAAGACGATGGGCCCGCCCCTGTCGTTTACAAACTCGACTTGCATTGCGAGGGATGCGTCAAGAAGATCAAACGCACCGCTCGCCACTTTCAAGGTGTGGAAACTGTTAAGGCAGATCTGTCGACTAACAAAGTGACCGTTACCGGTAAAATGGACGCCGAGAAGCTGAGAGAAAAGCTCGCTGAGAGAACCAAGAAGAAGGTTGAGTTCGTCACACCTCCGCCGAAGAAAGAGGCCGCCGCTGAAAAACCGCCGGAAAAGAAGGCTGAAGAGAAAAAACCTGAGGAGAAAAAACCCGAGGAGAAAAAACCAGAAGAAAAGCCTAAAGAGATCACGGTGGTTTTGAAGATCAAACTGCACTGTGACGGTTGCATTGCGAAAATCCGAAGAATCATTTCCAGGTTCAAAGGTGTTGGGTCGGTGAGTTTAGACGGAAGCAAGGACTTGGTGACGGTGAAGGGAACTATGGACGTGAAGGAGATGGTGCCGTACCTGAACGAGAAGCTGAAGCGAGCCGTGGAAGTGGTGCCTCCGAAGAAAGAAGAGGAGAAGAAAGAGAAAGACGGCGGCGGAGAGAAGAAAGAGAAAGAGGGCGAAGGAGAGAAGAAAGAAAAAGAAGTCGCTGCGGCGAAGGCAGAGGTTAACAAAATGGAATTCATGTACCCGATCGTGCCTCCTTCGTTTTGGTACCAAGGAGGACAATTTCCCGGTCAAACAAGTTACCCTATGGAGGTTCAACCATCCTATGGTAGTAACAATCATTTCGTAGAGCAAGGGTACGTGAACCATGGTTATCCTATGCAGCCACCTCTACCGTATTACATGCACCCTAACGCTCCTCCTCCGCAGATGTTCAGCGATGAGAACCCCAATGCTTGTTCAATCGTGTGA 957 0.4953 MGEQKEQPKNETEKKPEDGAPKKDDGPAPVVYKLDLHCEGCVKKIKRTARHFQGVETVKADLSTNKVTVTGKMDAEKLREKLAERTKKKVEFVTPPPKKEAAAEKPPEKKAEEKKPEEKKPEEKKPEEKPKEITVVLKIKLHCDGCIAKIRRIISRFKGVGSVSLDGSKDLVTVKGTMDVKEMVPYLNEKLKRAVEVVPPKKEEEKKEKDGGGEKKEKEGEGEKKEKEVAAAKAEVNKMEFMYPIVPPSFWYQGGQFPGQTSYPMEVQPSYGSNNHFVEQGYVNHGYPMQPPLPYYMHPNAPPPQMFSDENPNACSIV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2253 318 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g2253 318 Pfam Heavy-metal-associated domain 35 84 IPR006121 GO:0046872
Pvu7g2253 318 Pfam Heavy-metal-associated domain 138 196 IPR006121 GO:0046872
Pvu7g2253 318 SUPERFAMILY HMA, heavy metal-associated domain 134 189 IPR036163 GO:0046872
Pvu7g2253 318 Coils Coil 215 235 - -
Pvu7g2253 318 CDD HMA 36 91 IPR006121 GO:0046872
Pvu7g2253 318 Gene3D - 28 92 - -
Pvu7g2253 318 CDD HMA 136 196 IPR006121 GO:0046872
Pvu7g2253 318 SUPERFAMILY HMA, heavy metal-associated domain 31 85 IPR036163 GO:0046872
Pvu7g2253 318 MobiDBLite consensus disorder prediction 199 227 - -
Pvu7g2253 318 MobiDBLite consensus disorder prediction 86 129 - -
Pvu7g2253 318 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 317 - -
Pvu7g2253 318 ProSiteProfiles Heavy-metal-associated domain profile. 36 84 IPR006121 GO:0046872
Pvu7g2253 318 Gene3D - 132 204 - -
Pvu7g2253 318 MobiDBLite consensus disorder prediction 101 129 - -
Pvu7g2253 318 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 317 IPR044594 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2253 Pvu-Chr7 45855233 45857221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2253 - - gmx:100779502 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2253 7 45855233 45857221 Pvu7g2253 7 45855233 45857221 ECH
Pvu1g1856 1 44336592 44338358 Pvu7g2253 7 45855233 45857221 PCT