Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g1856 | ATGGCAGAGAAAAAAGGGAAGGCGAAGAATGAGGGCGATAATATGCCTGAATCGGGAGGAAAGCAAAACGACGTACCCGTCCCTGTCGTTTTGAAACTCGATTTGCATTGCGAGGGATGCGCCAAGAAGATCAAACGCGCCGTTCGCAAGTTCAACGGTGTGGAAGACGTTAATGCCGATCTATTTGGTAACAAGGTAACGGTTATTGGGAAGGGTGTCGACCCTGCCGTAGTGCGAACTAAACTAGCGGACAAGACTCGGCAGAAGGTAGAGATTATTTCTCCTCAACCGAAAAAAGATTCCGGCGCCGCCAGTAAACCACCGGAGAAAAAGGTGGAAGAGAATATAACAGAAGAGAAGAAGCCGGCAGATAAGAAAACCGAAGGAAAAACCCCGAAACAGGGCCCGGTGGTGTTGAAGATCCGATTGCACTGTGAAGGTTGCATTCAGAAAATTCGAAGGGTTATCCTAAAGATCAAAGGGGTTGAATCGGTGAACATAGATGCAAGCAAGAACTGGGTGAGCGTAAATGGCACGATGGATGTGAATGGAATGGTGGCGTATCTGGAAGAAAAGCTGAGGAGGAAGGTTGAGGTGGTCCCAGTCAATAAAAAGAGTGAAAAGAAAGAGGATCATAAGGAAGAGAAGGGGATGGAGAAGGAGAAGGTGAAGGATAATAAGGAAGAGAAGGAGAAGGTGAAGGATAATAAGGAAGAGAAGGTGAAGGAGAAGAAAGAAGGTGGTGGTGTTAAGAAAGGGGGTGGAGAAAAAGAAGAGGGTGTACCGAAGGTTGAGGTTAACAAAATGGAGCTCTACGGGTACGCTTACCCACCTCCACCTATGTACTGGTACGACGGTTATGGACCAGGTCAAAGTAGTAGTAGTGGTGGTTACTCGGTAGAGGTTCATTCAGGGTATGACAGTAATTACGGGAATTACCATGACCAATACCAGAATGGGTATGGAAACCAAGGGTACATGGTACAGCAACAACCACCACCGCCGTTCTACTTCAATCCCCATCATCCTCCTCCGCAGATGTTTAGCGATGAGAATCCTAATGCTTGTTTCGTTATGTGA | 1080 | 0.4694 | MAEKKGKAKNEGDNMPESGGKQNDVPVPVVLKLDLHCEGCAKKIKRAVRKFNGVEDVNADLFGNKVTVIGKGVDPAVVRTKLADKTRQKVEIISPQPKKDSGAASKPPEKKVEENITEEKKPADKKTEGKTPKQGPVVLKIRLHCEGCIQKIRRVILKIKGVESVNIDASKNWVSVNGTMDVNGMVAYLEEKLRRKVEVVPVNKKSEKKEDHKEEKGMEKEKVKDNKEEKEKVKDNKEEKVKEKKEGGGVKKGGGEKEEGVPKVEVNKMELYGYAYPPPPMYWYDGYGPGQSSSSGGYSVEVHSGYDSNYGNYHDQYQNGYGNQGYMVQQQPPPPFYFNPHHPPPQMFSDENPNACFVM* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g1856 | 359 | CDD | HMA | 35 | 84 | IPR006121 | GO:0046872 | |
| Pvu1g1856 | 359 | MobiDBLite | consensus disorder prediction | 86 | 133 | - | - | |
| Pvu1g1856 | 359 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Pvu1g1856 | 359 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 | 224 | 359 | IPR044594 | GO:0046872 | |
| Pvu1g1856 | 359 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 | 1 | 226 | IPR044594 | GO:0046872 | |
| Pvu1g1856 | 359 | SUPERFAMILY | HMA, heavy metal-associated domain | 138 | 191 | IPR036163 | GO:0046872 | |
| Pvu1g1856 | 359 | MobiDBLite | consensus disorder prediction | 203 | 259 | - | - | |
| Pvu1g1856 | 359 | Pfam | Heavy-metal-associated domain | 140 | 198 | IPR006121 | GO:0046872 | |
| Pvu1g1856 | 359 | Pfam | Heavy-metal-associated domain | 34 | 76 | IPR006121 | GO:0046872 | |
| Pvu1g1856 | 359 | SUPERFAMILY | HMA, heavy metal-associated domain | 30 | 84 | IPR036163 | GO:0046872 | |
| Pvu1g1856 | 359 | MobiDBLite | consensus disorder prediction | 103 | 131 | - | - | |
| Pvu1g1856 | 359 | ProSiteProfiles | Heavy-metal-associated domain profile. | 35 | 68 | IPR006121 | GO:0046872 | |
| Pvu1g1856 | 359 | Coils | Coil | 209 | 247 | - | - | |
| Pvu1g1856 | 359 | ProSiteProfiles | Heavy-metal-associated domain profile. | 143 | 198 | IPR006121 | GO:0046872 | |
| Pvu1g1856 | 359 | Gene3D | - | 134 | 208 | - | - | |
| Pvu1g1856 | 359 | Gene3D | - | 25 | 100 | - | - | |
| Pvu1g1856 | 359 | PANTHER | HEAVY METAL-ASSOCIATED DOMAIN PROTEIN | 1 | 226 | - | - | |
| Pvu1g1856 | 359 | PANTHER | HEAVY METAL-ASSOCIATED DOMAIN PROTEIN | 224 | 359 | - | - | |
| Pvu1g1856 | 359 | CDD | HMA | 143 | 176 | IPR006121 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g1856 | Pvu-Chr1 | 44336592 | 44338358 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu1g1856 | - | - | pvu:PHAVU_001G179100g | 592.423 |
Event-related genes