Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2241 ATGTTTTACTCACACCAGCTTCTTGCTCGGAAGGCTCCTCTTGGTCAAATATGGATGGCTGCGACTATGCACGCAAAGATAAACCGAAGAAAGCTGGACAAGCTTAACATCATTAAGATCTGCGAAGAGATTCTGAACCCATCGGTTCCTATGGCTCTTAGACTTTCTGGAATTCTCATGGGAGGAGTGGTGATTGTATATGAGAGAAAAGTGAAGCTCCTTTATGCATGGAAGGTGAAGACTGCCCCAGATCCAACATTGCTCCCCAAGGCAAAATCTAAGGCTAAGAAAGAGGCTGTTACTCTGCCTGGGATTGGTGAGACGAGCGTAGCAGATATTGAACAGTCCCTTCAGTTTTCCAAAACAGGCACCACAATGGGATTCCAACATAACGCCTTTTTCTCTATGCGACTTGATAGTGTGGATGTTCCCTTCAATAATAATGGAGCTACAGAGGACCAAGATCCATCTAAATTTCTCCATCAAGCTGACGTAGAGAATATTACCTTATTTGATCGCTTTGAAACATTCCAAGCTAATGCGTATCCATACAATCGCTTTGAGAGGTTTGATATTGAAGGAGATGAGGAAACACAGGTTAATGTAACTTCTGGAGATCAAATTCCAACCATGCTTATACCCTCCCCACCTCATGAAGACCAGCCCACCAGAGCTGATATGTTTCAAAACCTTCATCCTGGACAACAGCATAATCAGCAACCTAATGAAGCAATGACACCTAGACAGGAACCTAGAAGACGAAGACCAAATAAAAGAAAAAGAGGAGAACCATTAAATATCAAAATGGATGAGCAAACCATTATTCCTGTTCACATATACCAAGACTGGCTTCAGAATGCTTCTGATATTGTCTCGCGAAAGGGAAGAAAGAAAAAGCAAACCAATGTTTTGTCATCAACAAAGATAGCCAACCTCATGAAGCTGCCACCTGTTGCGCTAATTGGTCATTCATTTACGGCTGAAAATAACAATATATATTATCCAGCACCTATTCTTGACTTATGGATTAAGAGCATTCAACCACTCCACGATTCACCTTCAGAAAGAATTTCAGCCCACCATCCTCCAGAACCATCATTTTCATCGCCTCAAGGAGTACACAATGGAGATTTCATGCAATTTCCTTCTGAAGATTTTGACCCTAGGCTAGACCACCACCAGGCCCCTCCAGTGGAGAAGCAGCGAAAAAATATCCTCATGGATGAACTGACAGCTAATCTATTGAGAGGACATGAATCTACTCCGCATGTCTCATCAAGGAAAGCCGGAGACAGTGCACATTCCTTTCCAAGACCAGCGCCTGAACATGGTCCTGCCTCACATTCAGACTTTGATTCGGGAAGATTAAAAAATAGAAGGTATTCTTCATCTGCAAACGGCAGTGGGGGTCTTGAGCCACTAGTGGAGGATGTAAATTTCAAGTTAGCTAGGCTTTATGAAGATGGTCCCACGCCTGATCAAGAACTTCTCGTGGAAACAGGAGGACCCACCCAAACACAAGTAAACACCAATCATCCAGGGATAACCGATTCCATACAAGCACAGATGAAGGCACACTTTGACACACCTGGAGCTCCTCCTGTGGAATCCCTCCATAATCTAGCTGATGGAATGACACGGACATCGGCATCACAACTTTTCTATCAAATTTGTGTTCTTGCTTCCCGTGATGTGTTGAAAGTGGAGCAAGAGGTGCCCTATGGAGACATTCTCTTCTCTAGAGGATCAAAAATGTGA 1758 0.4346 MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLYAWKVKTAPDPTLLPKAKSKAKKEAVTLPGIGETSVADIEQSLQFSKTGTTMGFQHNAFFSMRLDSVDVPFNNNGATEDQDPSKFLHQADVENITLFDRFETFQANAYPYNRFERFDIEGDEETQVNVTSGDQIPTMLIPSPPHEDQPTRADMFQNLHPGQQHNQQPNEAMTPRQEPRRRRPNKRKRGEPLNIKMDEQTIIPVHIYQDWLQNASDIVSRKGRKKKQTNVLSSTKIANLMKLPPVALIGHSFTAENNNIYYPAPILDLWIKSIQPLHDSPSERISAHHPPEPSFSSPQGVHNGDFMQFPSEDFDPRLDHHQAPPVEKQRKNILMDELTANLLRGHESTPHVSSRKAGDSAHSFPRPAPEHGPASHSDFDSGRLKNRRYSSSANGSGGLEPLVEDVNFKLARLYEDGPTPDQELLVETGGPTQTQVNTNHPGITDSIQAQMKAHFDTPGAPPVESLHNLADGMTRTSASQLFYQICVLASRDVLKVEQEVPYGDILFSRGSKM* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2241 585 SUPERFAMILY "Winged helix" DNA-binding domain 521 585 IPR036390 -
Pvu7g2241 585 MobiDBLite consensus disorder prediction 352 403 - -
Pvu7g2241 585 MobiDBLite consensus disorder prediction 228 246 - -
Pvu7g2241 585 Pfam N terminus of Rad21 / Rec8 like protein 1 75 IPR006910 GO:0005515
Pvu7g2241 585 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 1 1 585 - -
Pvu7g2241 585 Pfam Conserved region of Rad21 / Rec8 like protein 535 585 IPR006909 -
Pvu7g2241 585 MobiDBLite consensus disorder prediction 419 472 - -
Pvu7g2241 585 MobiDBLite consensus disorder prediction 202 265 - -
Pvu7g2241 585 Gene3D Structural maintenance of chromosome 1. Chain E 507 585 IPR023093 -
Pvu7g2241 585 MobiDBLite consensus disorder prediction 384 403 - -
Pvu7g2241 585 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 585 IPR039781 GO:0007062|GO:0008278
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2241 Pvu-Chr7 45689101 45694794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2241 K06670 - gmx:100791405 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1997 1 45857040 45861177 Pvu7g2241 7 45689101 45694794 PCT