Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2213 ATGGCCGTGACCACTCCCTATCTCAATGCAACAGAAAAAAAGCACTGGTGGCTCACCAACCGTAAGGTTGTTGAGAAATACATCAGAGACGCTCGCTCTCTGATGGCCACGCAGGAACAGAGCGAGATCGCTTCGGCGCTCAACCTTCTCGACGCGGCTCTCGCGATCTATCCGCGGCTCGACGAAGCGCTGGAACTGCGAGCGAGGTGTCTGCTCTGTCTGCGGAGGTTCAAAGAGGTGGCGGATATGCTTCAGGACTACATTCCGAGCTTGAAAATGGCGAACGATGAGTCGGTTTCTTCCGATAGTTCTTCGCAACAACTTTCTAGGGAGGGCGCGAAGCTTCTCTCGTCTGATTCATCGACTTCGGATCAGAGTTTCAAGTGTTTCTCTGTCTCTGACTTGAAGAAGAAGGTTATGGCAGGACTGTGTAAAAGTTGCGACAAGGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGCTGTCACCTAGGCCTAATGGAAGACGCAATGGTTCTTCTCCAAACGGGTAAAAGGCTGGCTTCGGCCGCATTCCGCCGCGAGAGCGTGTGCTGGTCCGACGACAGCTTCTCCCTCTCGAACCCCCTCTTCTCCGGCGACACAACCCCACCCCGGGCCCCAATGCCGGAGTCCGAAGCAGTGACCCAACTCCTTGCCCACATAAAGCTCCTTCTCCGTCGCCGCGCCGCCGCGCTCGCTGCTCTGGAAGCCGGCCTCCACTCTGAGGCTATCCGCCACTTCTCCAAAATCGTTGACGGTCGCCGCGGCGCCCCGCAGGCCTTCCTCGCCGAGTGCTACATGTACAGAGCCTCTGCTCACCGCTCCGCCGGCCGAATCGCCGATTCAATCGCCGATTGCAACAGAACCCTCGCCCTGGACCCCACCTGCATCCAAGCGCTGGAAACCCGAGCCTCTATTCTGGAATCCATTCGGTGCTTCCCAGATTCACTCCACGACCTTGAACACCTCAAACTCCTCTACAACACCATCTTGCGCGATCGCAAACTCGCCGGCCCCGCCTGGAAGCGACAAAATGTGCGCGCCAGAGAAATCCCCGGGAAACTCTGCGCCCTCACGACCAAGATCCAGGAACTGAAACAGAGAGTAGCTTCGGGAGACACCTCCAACGTGGACTACCACGGTCTCATCGGATTGCGGCGCGGGTGTGGTCGTTCGGAGTTACAGAGAGCGCATTTGCTGCTGTCCCTGAAACACAAGCCCGACAAGGCAATGTGCTTCATTGAGCGGTGCGAGCTGGCGGAGGAGCGCGACCTCGATTCTGTTAAGGAGAGGGCGAGAATGTCGTCGCTCTTGCTCTACAGGCTGCTTCAGAAGGGTTACACCAATGTGATGGGTTCCATAATGGACGAGGAGGTTGCTGAGAAGCAGAGGATGAAAAATGTTCTGGAAGCTCAGGCTGTTCTGGAAGCTCAGGCCAAAGCCGTTAAATTGGAAAACCAAAAGTGCACCGTTTCGTCTCCTTCCACTGCGAATCCCGCGGTTTTTCAGGGAGTCTTTTGCCGCGATCTTGCGGTGGTTGGAAACTTGCTTTCGCAAACGGGATTCAACCGTTCCATTCCGGTCAAGTACGAGGCGTTGAGCTGCTGA 1632 0.5619 MAVTTPYLNATEKKHWWLTNRKVVEKYIRDARSLMATQEQSEIASALNLLDAALAIYPRLDEALELRARCLLCLRRFKEVADMLQDYIPSLKMANDESVSSDSSSQQLSREGAKLLSSDSSTSDQSFKCFSVSDLKKKVMAGLCKSCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSNPLFSGDTTPPRAPMPESEAVTQLLAHIKLLLRRRAAALAALEAGLHSEAIRHFSKIVDGRRGAPQAFLAECYMYRASAHRSAGRIADSIADCNRTLALDPTCIQALETRASILESIRCFPDSLHDLEHLKLLYNTILRDRKLAGPAWKRQNVRAREIPGKLCALTTKIQELKQRVASGDTSNVDYHGLIGLRRGCGRSELQRAHLLLSLKHKPDKAMCFIERCELAEERDLDSVKERARMSSLLLYRLLQKGYTNVMGSIMDEEVAEKQRMKNVLEAQAVLEAQAKAVKLENQKCTVSSPSTANPAVFQGVFCRDLAVVGNLLSQTGFNRSIPVKYEALSC* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2213 543 CDD DnaJ 386 418 IPR001623 -
Pvu7g2213 543 Gene3D Tetratricopeptide repeat domain 202 355 IPR011990 GO:0005515
Pvu7g2213 543 PANTHER - 1 543 - -
Pvu7g2213 543 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 543 - -
Pvu7g2213 543 SMART tpr_5 271 304 IPR019734 GO:0005515
Pvu7g2213 543 SMART tpr_5 152 185 IPR019734 GO:0005515
Pvu7g2213 543 SUPERFAMILY TPR-like 237 333 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2213 Pvu-Chr7 45423979 45427098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2213 - - gmx:100780225 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2213 7 45423979 45427098 Pvu7g2213 7 45423979 45427098 ECH
Pvu1g2194 1 47551381 47554816 Pvu7g2213 7 45423979 45427098 PCT