Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2194 ATGGCCATTACTACTCACACTCTATCCACCACAGACAAAAGGCATTGGTGGCTTACCAATCGAAAGATTGTTGAGAAATACATTAAAGACGCTCGGAGTCTTATAGCCACGCAAGATCAGAGGGAGATTGCTTCGGCTCTCAATCTTCTAGATGCGGCTCTGGCCATTTCTCCCAGGCTCGACCACGCGCTTGAGCTCAGAGCCAGGGCTCTCCTCTATTTGCGCCGCTTCAAGGAGGTTGCGGATATGCTTCAGGACTACATTCCGAGCCTCAGAATCAACGATGACTCATCCTCCTCCTCTGTTTCCTCCGACACCTCTTCGCAACAGCTTTCGAGAGAGGGAGTGAAGCTTCTCTCTTCCTCTGAGTCGTCGGAGCGGGATCAGAGCTTTAAATGTTTCTCTGTTTCCGACCTCAAGAAGAAGGTCATGGCAGGGCTGTATAAAACCTGCGAGAAGGAAGGGCAGTGGAGATACTTGGTATTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGGAAACGTCTTGCAAGCGCTACACTCCGGCGCGAGAGTGTGTGCTGGTCACAAGACAGCTTCAATGTTACGAACATCCAATTCTCCACCGACGCCGCAAATGCGCCACCTACAACTCCACCGCGAACTCTTCTTGCGGCGGATTCCGAGAGCGTGACCCAACTCCTCGGCCACATAAAGTTCCTGCTCCGGCGACGCGCCGCCGCACTGGCCGCCCTCGATGCCGGGCTCTACTCAGAAGCCATCCGCCACTTCTCGAAAATTGTGGACGGCCGGCGTAGCGCACCGCAGAGCTTCCTTGTCGAATGCTACATCCTCCGCGCCTCCGCGTACCGTTCCGCCGGTAGAATCGCAGAATCAATTGCGGATTGTAACCGCACACTTGCTTTGGACCCCACTAGCATTCAAGCACTCGAAATCAGAGCTTCACTCTTCGAAAACATTCGTTGTTTACCCGATTCTCTTCACGACCTCGAACACTTGAAGCTTCTCTACAATTCAATTTTACGAGACCGCAAGCTTCCCGGTCCTGCGTGGAAGCGCCACAACGTGCGTTATAGGGAAATTCCTGGGAAACTCTGCACCCTCACTATTAAAATTCAAGAACTGAAACAGAAGCTAGCATCTGGAGAAACAGGGAACGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCCCGGTCGGAGTTGGAGAGGGCTCACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGGCAACAGGGTTCATCGAAAGGTGTGAGCTTGCGGATGAGCGTGATGTTGAGTCGGTTAAAGAGAGGGCGAAGATGTCATCTTTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACTAATGTGATGAGTAACATCATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTCCTGGCTATTCAACTGCAGAAAGAAAAAGCCGATGAACCTGAGTCGTTCAGCAAGGTTGAGTGTACCCGGAGCAGTGAGGAGAATAATAATAATAATAATAATGATAATGATAATAACAATAATAATATTGCTCAAATGTCTGAAAATAGGTCCATGGTGTGTTCTTCTACTGTGAATCCGGCGATGTTTCAGGGCGTTTTCTGCCGTGACATTGCGGTGGTGGGGAACTTGCTTTCTCAGGTGGGGTTTAATCGGTCCATGCCAGTGAAGTATGAAGCGTTGAGCTGTTGA 1755 0.5014 MAITTHTLSTTDKRHWWLTNRKIVEKYIKDARSLIATQDQREIASALNLLDAALAISPRLDHALELRARALLYLRRFKEVADMLQDYIPSLRINDDSSSSSVSSDTSSQQLSREGVKLLSSSESSERDQSFKCFSVSDLKKKVMAGLYKTCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASATLRRESVCWSQDSFNVTNIQFSTDAANAPPTTPPRTLLAADSESVTQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLVECYILRASAYRSAGRIAESIADCNRTLALDPTSIQALEIRASLFENIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTIKIQELKQKLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERAKMSSLLLYRLVQKGYTNVMSNIMDEEAAEKQRKKAAFLAIQLQKEKADEPESFSKVECTRSSEENNNNNNNDNDNNNNNIAQMSENRSMVCSSTVNPAMFQGVFCRDIAVVGNLLSQVGFNRSMPVKYEALSC* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2194 584 Gene3D DnaJ domain 382 536 IPR036869 -
Pvu1g2194 584 MobiDBLite consensus disorder prediction 510 531 - -
Pvu1g2194 584 SMART tpr_5 282 315 IPR019734 GO:0005515
Pvu1g2194 584 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 584 - -
Pvu1g2194 584 MobiDBLite consensus disorder prediction 94 113 - -
Pvu1g2194 584 SUPERFAMILY TPR-like 248 343 IPR011990 GO:0005515
Pvu1g2194 584 Gene3D Tetratricopeptide repeat domain 30 348 IPR011990 GO:0005515
Pvu1g2194 584 MobiDBLite consensus disorder prediction 499 531 - -
Pvu1g2194 584 CDD DnaJ 397 431 IPR001623 -
Pvu1g2194 584 PANTHER - 1 584 - -
Pvu1g2194 584 SUPERFAMILY Chaperone J-domain 393 431 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2194 Pvu-Chr1 47551381 47554816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2194 - - vra:106757864 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2194 1 47551381 47554816 Pvu1g2194 1 47551381 47554816 ECH
Pvu1g2194 1 47551381 47554816 Pvu7g2213 7 45423979 45427098 PCT