Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2196 ATGGACCACTTCAGATTCAACCAAACCCTTTTCCTCGTCGGAGCATTCTCTTGCCTCCTTCTATCCACCATCGCCGCCGCTCGTTCCACTCCTCTAAACTCAGGCTCCCGTCAGCTTCTAGCTGTCACCCCTGAGCTTACACAATTCTGCAGCGACACCGATAACCCAACCCTCTGCACCGATACCATCGCTCCCCTCCTTGATGGCTCCTTCGACCCCGTCAAAGCTCTTGAGACCGAGATGAAAGTCACCCTCCAGAAGGCCAGCGACATCGCTGCTTCCATCTCCAAGCAGCTTCAAGACCCCACCACAAAGAAGAACGCCTTGGACGCCCTCAACATCTGCAAGTCGCAGTACGGAGACATGTTGGACAGCATAAACGAGTCTTTGAGTCTGGTGGCCCAGTTTAACGTGGTGGACGCTTATCACAAGATGAGCGCCGTTATATCTTACAAATCCAGCTGCGACGACGCTTACGACGAGTCTCCCGGCGTCGACATGCCCTTCCGCCAGGAATCCACCGTTCTGTTCCAGTTGAGTGGCAATTGCGTGACCGCCTTGCACACCATCGTTAACAACCACAAGGTGTAA 591 0.5415 MDHFRFNQTLFLVGAFSCLLLSTIAAARSTPLNSGSRQLLAVTPELTQFCSDTDNPTLCTDTIAPLLDGSFDPVKALETEMKVTLQKASDIAASISKQLQDPTTKKNALDALNICKSQYGDMLDSINESLSLVAQFNVVDAYHKMSAVISYKSSCDDAYDESPGVDMPFRQESTVLFQLSGNCVTALHTIVNNHKV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2196 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 189 IPR006501 GO:0004857
Pvu7g2196 196 CDD PMEI-like_2 44 183 - -
Pvu7g2196 196 Pfam Plant invertase/pectin methylesterase inhibitor 47 183 IPR006501 GO:0004857
Pvu7g2196 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 190 IPR035513 -
Pvu7g2196 196 SMART PMEI_2 41 186 IPR006501 GO:0004857
Pvu7g2196 196 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pvu7g2196 196 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 43 194 - -
Pvu7g2196 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 188 IPR035513 -
Pvu7g2196 196 PANTHER PECTINESTERASE 43 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2196 Pvu-Chr7 45251464 45252259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2196 - - pvu:PHAVU_007G213500g 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2213 1 47701438 47702088 Pvu7g2196 7 45251464 45252259 PCT