Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2213 ATGGGTTCCGAACAAAACCTTCTCTTCGCCGTCGTGTTCCTTTCTTCCCTTTTACTATCCACCCATGCCATCACCGATGCGCCGTCTCCCTCCCCATCCTCCTCCCAAATCTTCTCCACAGAGACCAACATCCTCACCATAAAATCCAACACAGTCAACACCCTCTTCAAACCCAGCTCCGAGATCCTAGACTTCTGCAAAGACACAGAGAACCCTACTCTCTGCTCTGAAACCATTGCCCCATTCATGCAAGACATGTTCGACCCCATTAAGGCCCTCGAGATCGAAATGGAAGCCACGCTCAACCAAAGCATGAAGGTCTCTAACATCATCTCCGAGGCCCTCACAAACCCCAACACCGACCGAAGGGCACGTGGCGCTCTCGACATATGCAAGTCTCAGTACAAGAGCATTGCACAAACTGTGAAAGATGCCGTGGAATTGTTGAACCAACAGAACGTGGTTGATGCTTATTACAAGTTCAGCTCCGTTATATCTGACCAATCAACTTGCGAAGACGCGTTTGTGGAATCTCGCGGAGTTACCATTCCCTTCGCTGATGACTCTCTCGGTGTCTTTCAGCTCGGTGGCAATTGCTTGGCCATCATGGATTCTATGGTTAACAATCGTAACCGTTATTTCTTGGTTTGA 651 0.4916 MGSEQNLLFAVVFLSSLLLSTHAITDAPSPSPSSSQIFSTETNILTIKSNTVNTLFKPSSEILDFCKDTENPTLCSETIAPFMQDMFDPIKALEIEMEATLNQSMKVSNIISEALTNPNTDRRARGALDICKSQYKSIAQTVKDAVELLNQQNVVDAYYKFSSVISDQSTCEDAFVESRGVTIPFADDSLGVFQLGGNCLAIMDSMVNNRNRYFLV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2213 216 CDD PMEI-like_2 59 203 - -
Pvu1g2213 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 205 IPR006501 GO:0004857
Pvu1g2213 216 PANTHER PECTINESTERASE 7 210 - -
Pvu1g2213 216 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 7 210 - -
Pvu1g2213 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 206 IPR035513 -
Pvu1g2213 216 SMART PMEI_2 57 202 IPR006501 GO:0004857
Pvu1g2213 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 207 IPR035513 -
Pvu1g2213 216 Pfam Plant invertase/pectin methylesterase inhibitor 62 202 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2213 Pvu-Chr1 47701438 47702088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2213 - - vun:114163609 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2213 1 47701438 47702088 Pvu7g2196 7 45251464 45252259 PCT