Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2182 ATGGTTGCGCCTTGTCCAACTTCCATGATGGTAAGAACCAAGAAAACAAAGGCTATGGGAGTTCCGACGATCGACCTTTCATTGGAAAGGTCGAAGCTGTCGGAACTAGTGGTGAAAGCATGTGAAGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGGCAAAGGAGGTAATTTCAAGGTTGGAAGAGGAGGGAACGGAGTTTTTTTCCAAAACCTCCTCAGAGAAGCGTCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGCTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTCCTCCTTCATTCCAATCCTCTTTCCGTATCTGAGAGATCCCAAACCATAGCCAACGACCCTACCAAGTTCAGTTGCGCCGTGAATGATTATATAGAAGCAGCTAAAGGACTAACATGTGAGATTCTTGATCTTGTGGCGGAGGGTTTGTGGGTCCAAGACAAGTTTTCACTCAGCAACCTCATCAAAGACGTCCATAGTGACTCACTCCTCAGGATTAATCAGTACCCTCCCGTGAGCCTAAAGGGCAACAAGAATTGGGACACGTCCAAACCTGAGCCACATCAACTCCAGAACCAAAATAATAATAATAGTAACAGCAACCACAACAACAACATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGATCCAACAACGTGGATGGTCTTCAGATTTCCACCCACGATGGCTTGTGGATTCCTGTCCCCCCTGACCCTAATGAATTCTTCGTTATGGTTGGTGATGCCCTGCAGGTTTTGACAAATGGAAGGTTTATAAGCGTGAGACACAGAGTATTGACCAACACAACAAAGGCCAGAATGTCTATGATGTACTTTGCTGCACCACCGCTGAATTGGTGTATCACTCCACTGCCGAAGATGGTGACATCCCACAATCCAAGTCTGTATAAGCCCTTCACGTGGGCTCAATACAAGCAAGCAGCATACTCTCTACGACTGGGAGACACTCGTCTTGATCTCTTCAAGATCCAACGACAACTAGATACCCATCTCGCATCTGCTTCTCCCTGA 1080 0.4704 MVAPCPTSMMVRTKKTKAMGVPTIDLSLERSKLSELVVKACEEYGFFKVVNHSVAKEVISRLEEEGTEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHSNPLSVSERSQTIANDPTKFSCAVNDYIEAAKGLTCEILDLVAEGLWVQDKFSLSNLIKDVHSDSLLRINQYPPVSLKGNKNWDTSKPEPHQLQNQNNNNSNSNHNNNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFISVRHRVLTNTTKARMSMMYFAAPPLNWCITPLPKMVTSHNPSLYKPFTWAQYKQAAYSLRLGDTRLDLFKIQRQLDTHLASASP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2182 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 347 - -
Pvu7g2182 359 Gene3D - 3 335 IPR027443 -
Pvu7g2182 359 SUPERFAMILY Clavaminate synthase-like 6 338 - -
Pvu7g2182 359 Pfam 2OG-Fe(II) oxygenase superfamily 199 297 IPR044861 -
Pvu7g2182 359 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 347 - -
Pvu7g2182 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
Pvu7g2182 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 298 IPR005123 -
Pvu7g2182 359 MobiDBLite consensus disorder prediction 186 218 - -
Pvu7g2182 359 PRINTS Isopenicillin N synthase signature 37 54 - -
Pvu7g2182 359 PRINTS Isopenicillin N synthase signature 222 243 - -
Pvu7g2182 359 PRINTS Isopenicillin N synthase signature 258 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2182 Pvu-Chr7 45095197 45099291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2182 12 346 Glycosyltransferase AT5G59530 26.891 9.28e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2182 K04125 - gmx:100779525 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2182 7 45095197 45099291 Pvu7g2182 7 45095197 45099291 ECH
Pvu1g2224 1 47815621 47818510 Pvu7g2182 7 45095197 45099291 PCT