Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2224 ATGGTTGTTCCTTCTTCTCCAACAGCCACAAAGGCAATGAGAATCCCTACCATTGACCTATCCATGGAAAGGTCACAGTTATCGCAAAGTGTGGTGAAAGCCTGCGAGGAATACGGTTTCTTCAGAGTGGTTAACCACAGTGTGCCGAAGGAGGTTATTGCAAGATTGGAAGAAGAAGGTGGAGAGTTTTTCTCAAAACCCAGCCACCAGAAGCGTCGGGCTGGGCCCGCAAGCCCTTTCGGTTACGGCTTCACCAACATTGGGCCCAATGGAGATATGGGTGACCTCGAGTATCTTCTACTTCATGCTAACCCTCTCTCCATAGCCCAGAGATCCAAAACCATCGCTAACGACTCCACCAAGTTCAGTGTTGTTGTGAAGGAATATGTGGAAGTAGTGAAAGAAGTAACGTGCGATATTCTAGATCTGGTGGTTGAGGGGTTGGGGGTCCCAGACAAGTTAGCTCTTAGCAGTCTCATCAGAGATTTTCACAGCGATTCTGTTCTGAGGATTAATCACTACCCTCCATTGAAGGTGAAGACGAAGGGTAACAAGAACAGCATTGGTTTCGGGGCGCATTCTGACCCTCAGATGTTGACCATCATGCGGTCCAACGATGTGGGTGGCCTCCAGATTTACACCCGTGAGGGGCTGTGGCTTCCTGTTCCTCCTGACCCCACAAATTTCTTTGTCATGGTTGGCGATGTCTTGCAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGGCACAGGGCATTGACCAACACGTTGGAGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATTGCTCCTCTACCCGAGATGCTGTCACCGCCACAGAATCGAAGTTTATATAAGCCCTTCACATGGGCCCAGTACAAGCAAGCAGCATATTCTTCACGCCTTGGAGATTCCCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCTTCTCTCTTCCTCTCCATCACACTTTCAATGTTGA 1005 0.4896 MVVPSSPTATKAMRIPTIDLSMERSQLSQSVVKACEEYGFFRVVNHSVPKEVIARLEEEGGEFFSKPSHQKRRAGPASPFGYGFTNIGPNGDMGDLEYLLLHANPLSIAQRSKTIANDSTKFSVVVKEYVEVVKEVTCDILDLVVEGLGVPDKLALSSLIRDFHSDSVLRINHYPPLKVKTKGNKNSIGFGAHSDPQMLTIMRSNDVGGLQIYTREGLWLPVPPDPTNFFVMVGDVLQVMTNGKFMSVRHRALTNTLEARMSMMYFAAPPLDWWIAPLPEMLSPPQNRSLYKPFTWAQYKQAAYSSRLGDSRLDLFKAQLDTHLLSSSPSHFQC* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2224 334 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 269 IPR005123 -
Pvu1g2224 334 Pfam 2OG-Fe(II) oxygenase superfamily 166 268 IPR044861 -
Pvu1g2224 334 SUPERFAMILY Clavaminate synthase-like 5 310 - -
Pvu1g2224 334 Gene3D - 3 309 IPR027443 -
Pvu1g2224 334 Pfam non-haem dioxygenase in morphine synthesis N-terminal 15 88 IPR026992 -
Pvu1g2224 334 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 319 - -
Pvu1g2224 334 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 8 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2224 Pvu-Chr1 47815621 47818510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2224 2 317 Glycosyltransferase AT5G59530 25.970 1.18e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2224 K04125 - gmx:100777233 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2224 1 47815621 47818510 Pvu1g2224 1 47815621 47818510 ECH
Pvu1g2224 1 47815621 47818510 Pvu7g2182 7 45095197 45099291 PCT