Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2148 ATGGCACTCTCATTCTCCTCTATGGGTGTCTTTCTCTCCACCTTCTTATTCTGCTTCTCTTTGGGGGCAGAAGCTCGTACATCACCCGTTTCTTCTGTGGTTAGCGAAGAGCTTTTTAATTCCATTTTCCTACACAAAGACAACGCTGCATGCCCGGCTAAAAACTTCTACACCTATGATTCCTTCATCATGGCATCCAGAAGCTTCCGTCGATTTGGTTCTTGTGGAAGTTTAACCACACGCAAGCGTGAGGTTGCGGCGTTTCTTGCTCAAATTTCGCATGAAACCACCGGTGGGTGGGCTACTGCACCCGATGGACCCTATGCTTGGGGATTGTGCTTCAAGGAAGAAGTTAGTCCTCAGAGTGATTATTGTGATTCCACCAACCAACAATGGCCTTGTTTCCCAGGAAAAACTTATAAAGGAAGAGGACCAATTCAACTTTCATGGAACTACAACTATGGAGCAGCAGGGAAGGCCTTGGGATTTGATGGATTGAGAAACCCTGATATAGTGTCAAACAATTCATTGATTGCCTTTAAAACAGCTTTGTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACAATGTGATGATTGGAAAATATGTGGCCAGAGAGGCTGACTTAGCAGCTAATAGATCTGCAGGGTATGGCCTTGTGACTAACATAATCAATGGTGGACTTGAATGTGGAATTCCTGATGATGCAAGGGTGAATAACCGCATTGAATACTTCAAAAGATATGCAACATTGTTTAATGTAGATACAGGACCTAACTTGGATTGTGCATACCAAAAGTCCTTTTAA 816 0.435 MALSFSSMGVFLSTFLFCFSLGAEARTSPVSSVVSEELFNSIFLHKDNAACPAKNFYTYDSFIMASRSFRRFGSCGSLTTRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSTNQQWPCFPGKTYKGRGPIQLSWNYNYGAAGKALGFDGLRNPDIVSNNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVAREADLAANRSAGYGLVTNIINGGLECGIPDDARVNNRIEYFKRYATLFNVDTGPNLDCAYQKSF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2148 271 Pfam Chitinase class I 33 265 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu7g2148 271 Gene3D - 37 271 - -
Pvu7g2148 271 PANTHER CHITINASE-RELATED 11 271 - -
Pvu7g2148 271 ProSitePatterns Chitinases family 19 signature 2. 178 188 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu7g2148 271 PANTHER CHITINASE 10 11 271 - -
Pvu7g2148 271 CDD chitinase_GH19 34 265 - -
Pvu7g2148 271 ProSitePatterns Chitinases family 19 signature 1. 51 73 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu7g2148 271 Gene3D Endochitinase, domain 2 116 174 - -
Pvu7g2148 271 PIRSF Endochitinase 4 271 IPR016283 GO:0004568|GO:0005975
Pvu7g2148 271 SUPERFAMILY Lysozyme-like 30 271 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2148 Pvu-Chr7 44763578 44764807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2148 13 271 Glycoside Hydrolase AT1G02360 69.549 1.13e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2148 - - vra:106754841 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2148 7 44763578 44764807 Pvu7g2148 7 44763578 44764807 ECH
Pvu1g2261 1 48122230 48123522 Pvu7g2148 7 44763578 44764807 PCT