Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2125 ATGGTTAACCATACTATGAAGCTTCCCAACTTTGTTCTTCTTCTCACTTCGGCTCTTCTCTTAGCCACCACCGTCTCATCGGATCCTGACCTTCTTCAAGACCTCTGTGTCGCCGACCCTTCCTCAGGTGTGAAAGTGAATGGATTCACCTGCAAAGAAGCATCTAAGGTTAATGCCTCAGATTTCTTCTCCAGCATACTAGCCAAACCAGGAGCCACCAACAACACCTTTGGGTCCTTGGTGACTGGAGCCAATGTTGAGAAAGTCCCAGGACTCAACACCCTTGGTGTGTCTCTGTCAAGGATTGACTATGCACCAGATGGCATCAACCCTCCTCACACTCACCCTCGTGCCACTGAGATTGTGTTTGTACTTGAAGGGCAACTAGATGTAGGGTTCATAACCACTGCCAATGTGCTCATATCAAAAACCATTAACAAGGGTGAAATATTTGTGTTTCCAAAAGGCTTGGTTCACTTCCAGAAGAACAATGCCAATGTCCCTGCTGCTGTCATTTCAGCCTTCAATAGCCAACTTCCAGGAACACAGTCCATCGCTACAACCTTGTTTGCTGCCACACCATCACTTCCAGACCATGTCTTGACCAAGACCTTCCAGATTGGAACCAAGGAGGTTCAGAAAATCAAGACCAGGCTTCTACCTAAAAAGTAG 672 0.4688 MVNHTMKLPNFVLLLTSALLLATTVSSDPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKPGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKTRLLPKK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2125 223 SUPERFAMILY RmlC-like cupins 58 217 IPR011051 -
Pvu7g2125 223 Gene3D Jelly Rolls 27 220 IPR014710 -
Pvu7g2125 223 CDD cupin_OxOx 28 219 - -
Pvu7g2125 223 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 20 221 - -
Pvu7g2125 223 Pfam Cupin 67 213 IPR006045 -
Pvu7g2125 223 SMART Cupin_1_3 64 213 IPR006045 -
Pvu7g2125 223 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Pvu7g2125 223 PRINTS Germin signature 143 163 IPR001929 GO:0030145
Pvu7g2125 223 PRINTS Germin signature 176 191 IPR001929 GO:0030145
Pvu7g2125 223 PANTHER GERMIN-LIKE PROTEIN 20 221 - -
Pvu7g2125 223 ProSitePatterns Germin family signature. 108 121 IPR019780 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2125 Pvu-Chr7 44582433 44584284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2125 13 223 Miscellaneous Gene Families AT3G05930 55.660 4.47e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2125 - - gmx:100791828 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2287 1 48354294 48355917 Pvu7g2125 7 44582433 44584284 PCT