Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2103 ATGGCCAAGGAAGCTTCTCTATGCCTCTTGTTTCTCTCCTTTCTCATTATCTCCAGTTCTGGATCTCTGGTGGGTATTTCCTACCGTGAGAGGGGAGGCACTTCAACATCTGCTAGAACCATATCATTCCTCCAGCAAAAGAACGTTTCCATGTCCCAGATTCGAATTTTTGTTACAGATCACAGGATTTTGAGCACGCTCAGCAACTCCATGGTGCCGACTGATTTGTACTTGAACAGAAGTCAAGTTCAAAGTTTAATTACTTCGAAACCCTCCGAACTAAAAGCTCGTCTACTTAACTTTCTCCCACATTCAAACATCAAAAGCATCATTGCTAACTGTGGCAGTGAGTGCTTAGCACAAAATGAGATGCCTTTGTTCTCACGTGCTTTGAAATCAATTGGTTCAGTTCTCAGAGAGCTTCATATAGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCATTCTTAGAAAAGTTGAATACATCGCATGAAAATAGTATTCGTAGGATTCTTTCATTTATAAGGGAAATGAAATCCTTTGTCATGGTAGAAGACAGCATTGATGGAGAATTAAGCATGGATAGTCACTTTCTTCATGCCATAGTAAAACGAGCCACTCTTGCTGCTTCCATTCTTCCTCGCAAAGATGTTCCTATTGTTCTAACAATCAAGAGCACAGTTATCCCCACTTCAATGGAATTAGCTCAATTTTGTGAGAGGCTATCCAAATATCTAGAAGCAAAAACTCATATTACAAAAAGAATAGCTGCATTGTATGCAGAGATGCATAGAACAGAAGATTTTGCAAGTAAAGAACTCAAAAGGGAAGAGGAGGAACTGTTTCCTGTCTCCCGCAGAGAGATGCTCAGTGAATCCCACAAAAGGAGAAGTCTAGATGATACAACCAGCCCAACAAACACAGTTTTCCCCACAAATCCAGCATCATCCATTCCAATCATCACGCCCCCAGATACACCAACCATCATCACAGTTCCTGCCACAAATCCTGTCACAATTTCCCCTTCCAATCCTGCTGGAATGCCCGTGACAGTTCCTTCTACCACACCTGTGCCTTTTCCTCCCACAAATCCAGCCAATACACCAGTACCAGTGAGCAATCCGGCTACAACAACTCCTGTAGGGATACCACCCCCAACAACCAACCCTGTAACTTATCCACCTTCATCAGGAAATGTTCCTGTCACAAATCCCCAACCTCAACCACCCCCTGCAAACACTAATGCTCCAGCCATTCAGGGGCAGAGTTGGTGTGTGGCAAAACAAGGAGCTGCTGAAGCTTCTCTTCAAGCAGCACTAGACTATGCTTGTGGAATGGGTGGGTCAGATTGTTCTCAAATTCAGCAGGGTGGGAATTGTTACAGTCCAGTTACATTGCAGAACCATGCTTCTTTTGCCTTCAACAGCTACTATCAAAAGAATCCAGCTCCAACAAGCTGCGACTTTGGAGGGAGTGCCACCTTAGTTAACACAAATCCAAGCTCGGGTTCATGCGTTTTCCTATCCTCATCGTCATCAACAACAACACCAAAGTCATCACCCCCAACACCACTTACACAATCAAGTCCAACACTACCACCACCAAGTCCAGTAACGCCTGCACCATCAATTCCAACGGCACCACCAACAACATCAGTAACAGGCCCATTCGGGTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAACCCCGCGTCAGGTACAATGCCAGATTTTGGGTATGAAAGCCCTCCTGTTGTAAATACAACGTCAGCCTCGCATTCTATGAGTTTGAGACCTTCTGTTGGCTGCATTGTTCTGATGGTATCATTGGTCACTACGAGACTCGGTATGCATCCATAG 1866 0.4443 MAKEASLCLLFLSFLIISSSGSLVGISYRERGGTSTSARTISFLQQKNVSMSQIRIFVTDHRILSTLSNSMVPTDLYLNRSQVQSLITSKPSELKARLLNFLPHSNIKSIIANCGSECLAQNEMPLFSRALKSIGSVLRELHIGREVKISVAFPLSFLEKLNTSHENSIRRILSFIREMKSFVMVEDSIDGELSMDSHFLHAIVKRATLAASILPRKDVPIVLTIKSTVIPTSMELAQFCERLSKYLEAKTHITKRIAALYAEMHRTEDFASKELKREEEELFPVSRREMLSESHKRRSLDDTTSPTNTVFPTNPASSIPIITPPDTPTIITVPATNPVTISPSNPAGMPVTVPSTTPVPFPPTNPANTPVPVSNPATTTPVGIPPPTTNPVTYPPSSGNVPVTNPQPQPPPANTNAPAIQGQSWCVAKQGAAEASLQAALDYACGMGGSDCSQIQQGGNCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGSATLVNTNPSSGSCVFLSSSSSTTTPKSSPPTPLTQSSPTLPPPSPVTPAPSIPTAPPTTSVTGPFGYGTPPSVLNSSNPASGTMPDFGYESPPVVNTTSASHSMSLRPSVGCIVLMVSLVTTRLGMHP* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2103 621 SMART X8_cls 424 508 IPR012946 -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 551 577 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 304 316 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 320 336 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 351 363 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 365 386 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 395 411 - -
Pvu7g2103 621 PRINTS Proline rich extensin signature 511 536 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 362 418 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 379 393 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 507 578 - -
Pvu7g2103 621 Gene3D - 419 521 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 303 317 - -
Pvu7g2103 621 Pfam X8 domain 425 495 IPR012946 -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 288 302 - -
Pvu7g2103 621 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 141 585 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 401 415 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 288 322 - -
Pvu7g2103 621 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 141 585 IPR044965 GO:0004553|GO:0005975
Pvu7g2103 621 MobiDBLite consensus disorder prediction 524 550 - -
Pvu7g2103 621 Gene3D Glycosidases 24 188 - -
Pvu7g2103 621 Coils Coil 261 281 - -
Pvu7g2103 621 MobiDBLite consensus disorder prediction 507 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2103 Pvu-Chr7 44360222 44363789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2103 386 508 Glycoside Hydrolase AT2G05790 49.206 4.93e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2103 - - gmx:100781884 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2103 7 44360222 44363789 Pvu7g2103 7 44360222 44363789 ECH
Pvu1g2300 1 48471233 48474615 Pvu7g2103 7 44360222 44363789 PCT