Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu7g2091 | ATGCTGCAGTGCATATTTCTCCTCTCAGATGCCGGAGAGGTAATGCTAGAGAAACAGCTTTCGGGGCACTTAGTCGATCGCTCCATTTGTGCCTGGTTCTGGGAACAAGCCGTTTCACTTGGCGACTCCTTCAAGCAACAACCAGTGATTAGCTCTCATACGCATTACATTTTCCAAGTTTTTCGTGATGGAATCACTTTTTTGGGGTGCACGCAAATTGAAATGCCACCCTTGATGGCCATTGAGTTTCTCTGTAGGGTAGCTGATGTCCTCAATGATTATTTTGGGACCTTAAACGAAGACATAATTAAAGACAACTTTGTCATTGTGTACGAGCTGTTGGATGAGATGATAGATAATGGCTTCCCCTTAACTACAGAACCTAGTAGCCTGCGAGAGATTATTTATCCGCCAAATGTGGTTAACAAAGCCTTGAGCATTGTGACTGGTAGCAATTCAAATGTGAGTGATACCCTTCCTAGGGCTACCGCATCTTGTATTCCCTGGAGAACATCAGAGCCAAAGTACTCCAACAATGAAGTATATGTAGAACTTGTTGAAGAAATGGATGCGATTATTAACAGGGATGGAGGTTTGTTGAAATGTGAGATCTATGGTGAAGTTCAAGTAAATTCCCGTATCTCAGGTTTTCCTGATTTAACCCTTTCATTTACAAATCCTTCCGTCCTAGATGATGTCAGGTTCCATCCGTGTGTTCGTTTTCGGCCTTGGGAGTCTCATCAAATTCTTTCTTTTGTGCCTCCTGATGGACAATTTAAGCTTATGAGCTACAGAGTAAGAGAGTTGAAGAGCACCCCAATATATGTAAAGCCACAGTTAATTTCGGATGGTGGGACATGTCATCTTAGTGTATTGGTTGGAATAAGAAATGATCCTGGAAAGACAATCGACTCGGTTACTGTTCAGTTTCAGCTCCCTCCGTTCATCTTATCAGCTGATTTGACTTCAAATCATGGAACAGTGAACATCCTTGCTAAAAAGACATGCATATGGTCCATTGGTCAGATTCCAAAAGATAAAGCTCCTTCCATGTCTGGATTATTGGTGGTTGAAACTGGTTTGGAGCGCCTTCATGTCTTCCCCTCATTTCAAGTGGGTTTTAGGATCATGGGTGTCGCCCTCTCTGGTCTGCAAATAGATAAACTGGATCTGAAGAATGAACCAGGCCGATTTTACAAAGGTTTTAGAGCTCTTACTCGGGCAGGTCAATTTGATGTAAGATCATAA | 1248 | 0.4239 | MLQCIFLLSDAGEVMLEKQLSGHLVDRSICAWFWEQAVSLGDSFKQQPVISSHTHYIFQVFRDGITFLGCTQIEMPPLMAIEFLCRVADVLNDYFGTLNEDIIKDNFVIVYELLDEMIDNGFPLTTEPSSLREIIYPPNVVNKALSIVTGSNSNVSDTLPRATASCIPWRTSEPKYSNNEVYVELVEEMDAIINRDGGLLKCEIYGEVQVNSRISGFPDLTLSFTNPSVLDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRELKSTPIYVKPQLISDGGTCHLSVLVGIRNDPGKTIDSVTVQFQLPPFILSADLTSNHGTVNILAKKTCIWSIGQIPKDKAPSMSGLLVVETGLERLHVFPSFQVGFRIMGVALSGLQIDKLDLKNEPGRFYKGFRALTRAGQFDVRS* | 416 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu7g2091 | 415 | PIRSF | AP_complex_mu | 1 | 415 | IPR001392 | GO:0006886|GO:0016192|GO:0030131 | |
| Pvu7g2091 | 415 | PANTHER | AP COMPLEX SUBUNIT MU | 7 | 414 | - | - | |
| Pvu7g2091 | 415 | CDD | AP-3_Mu3_Cterm | 167 | 414 | - | - | |
| Pvu7g2091 | 415 | Gene3D | Mu homology domain, subdomain B | 167 | 410 | - | - | |
| Pvu7g2091 | 415 | Gene3D | - | 1 | 142 | - | - | |
| Pvu7g2091 | 415 | Gene3D | Mu homology domain, subdomain B | 272 | 412 | - | - | |
| Pvu7g2091 | 415 | SUPERFAMILY | SNARE-like | 1 | 143 | IPR011012 | - | |
| Pvu7g2091 | 415 | PRINTS | Clathrin coat assembly protein signature | 100 | 127 | IPR001392 | GO:0006886|GO:0016192|GO:0030131 | |
| Pvu7g2091 | 415 | PRINTS | Clathrin coat assembly protein signature | 230 | 257 | IPR001392 | GO:0006886|GO:0016192|GO:0030131 | |
| Pvu7g2091 | 415 | PRINTS | Clathrin coat assembly protein signature | 337 | 348 | IPR001392 | GO:0006886|GO:0016192|GO:0030131 | |
| Pvu7g2091 | 415 | Pfam | Adaptor complexes medium subunit family | 167 | 414 | IPR028565 | - | |
| Pvu7g2091 | 415 | CDD | AP3_Mu_N | 3 | 142 | - | - | |
| Pvu7g2091 | 415 | ProSiteProfiles | Mu homology domain (MHD) profile. | 178 | 414 | IPR028565 | - | |
| Pvu7g2091 | 415 | PANTHER | CARMINE, ISOFORM A | 7 | 414 | - | - | |
| Pvu7g2091 | 415 | SUPERFAMILY | Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 167 | 414 | IPR036168 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu7g2091 | Pvu-Chr7 | 44245263 | 44248083 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu7g2091 | K12398 | - | gmx:100782926 | 771.155 |
Event-related genes