Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2076 ATGGGGTCTCTGGTTTCTGAAACAGCCAAGATGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCATTCTGCTTGTTTCTCTGGGGGGCTCATGTATGTCTTTGGGGGATGTTGTGGAGGGCTACATTTCGGAGATGTTCTGTGTTTGGACCTAGTCAAAATGAATTGGAGCAAGCTTGCCACCACGGGTGAAAAGCCAGGCCCTAGAGATAGCCATGGTGCTGTTCTTGTAGGGCATAGAATGATAGTTTTCGGTGGCACCAATGGGTTAAAGAAGGTGAATGACACTCATATATTGGACCTTGTTACCAAAGAGTGGATTCGTCCTAAATGTGAAGGGACTCCTCCTTCTCCAAGGGAAAGTCACACTGCTACTCTAGTTGGTGATGAAAGACTAGTGATTTTTGGTGGCAGTGGTGAAGGTGACGCAAACTACTTAAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTCCGGTCAAAGGTGATTTGCCTGTCCCTAGGGACAGTCACAGCACTCTTGCAATTGGGAACAGACTTTTTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTTGACATGGACACAATGACTTGGTCTAAGTTGAAAATTCAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATGCGGCTTTGAGCATTGGTACCAAGGTGTACGTGATTGGAGGGGTGGGAGATAAACGTTATTACAATGACATATGGGTCTTTGACATCTGCACCTGTTCGTGGGCTCAGCTTGATATTCGTGGTCAACCGCCACAGGGGCGATTTTCTCACACAGCTGTTTTGGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAGCGTCCTTTAAACGAGTTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCTAATGGACGTTACAACATTTCCATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAACAGAGGACCATACCTGGAAGACCTGATACCAACTTGAAAACTCCTTGCCTGGAGAACAATATGGAAGCCATAGGAAAATGGACTAATGAAGTTGTGTCGGATAAAGTGCAACCTTGTAACATTAATTCGGGCACTTCACAACAAAAGAGGAAGAGAATTGCTGTGACAAAGGTGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCTTCTCAATCTGATCAAGAACAGACCCCAGCTCAAAAAGCAAATGTTTCTATCATGGATTCTCAGAGGTATCATTGGTTTAAACAGGTGAATAAAAGTCCAAGCTATTGCCAGCTTGACAATGACTCAAGTAACACCACAGTTATGAAGAATATCACACAAAGAAGTGTTCGTCCCATGAAACATCAACCTAAACAAGAGCAGTATGTTCACATAGATGATGGTAGAAAAGTACCTCGACACACTCAACACCTGATTGGTGCTGAAGTTCGAGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGTTGTTAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCACCAGGAGCTGCAGTATTCTCCACATGTGTGGAGCCAAACAGTTCTTTATCACCTTCATTTCCCTCCACTCAAACCTTTATGAACTCAAATGATGTGAGGGATTCTGAGCAAGTAACTAGTTGTTCACGTGCAGAGCCCTGCCATGGCTTCAGGCAACCTGTGCTATCTCAACCATCACCAATAATGAGAAGGACTACTTCTGCATCTTTAGCCAAAGAGCATCAAATGAGGAGTGACCTTCAAGGCTTGGTTTTAACACTTGGAGGGCCTGCAAGTGGTAACCATGCTTGA 1893 0.4459 MGSLVSETAKMKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLVKMNWSKLATTGEKPGPRDSHGAVLVGHRMIVFGGTNGLKKVNDTHILDLVTKEWIRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPPVKGDLPVPRDSHSTLAIGNRLFVYGGDCGDQYQGDVNVLDMDTMTWSKLKIQGSSPGVRAGHAALSIGTKVYVIGGVGDKRYYNDIWVFDICTCSWAQLDIRGQPPQGRFSHTAVLADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEQRTIPGRPDTNLKTPCLENNMEAIGKWTNEVVSDKVQPCNINSGTSQQKRKRIAVTKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPAQKANVSIMDSQRYHWFKQVNKSPSYCQLDNDSSNTTVMKNITQRSVRPMKHQPKQEQYVHIDDGRKVPRHTQHLIGAEVRGKVDGAFDSGLLMTAVVNGRVFRGVLFAPGAAVFSTCVEPNSSLSPSFPSTQTFMNSNDVRDSEQVTSCSRAEPCHGFRQPVLSQPSPIMRRTTSASLAKEHQMRSDLQGLVLTLGGPASGNHA* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2076 630 PANTHER OS01G0300900 PROTEIN 1 628 - -
Pvu7g2076 630 MobiDBLite consensus disorder prediction 408 429 - -
Pvu7g2076 630 Gene3D - 11 170 IPR015915 GO:0005515
Pvu7g2076 630 SUPERFAMILY Kelch motif 175 328 IPR015915 GO:0005515
Pvu7g2076 630 PANTHER KELCH REPEAT DOMAIN 1 628 - -
Pvu7g2076 630 MobiDBLite consensus disorder prediction 403 429 - -
Pvu7g2076 630 Pfam Galactose oxidase, central domain 37 85 - -
Pvu7g2076 630 Pfam Galactose oxidase, central domain 87 135 - -
Pvu7g2076 630 Pfam Galactose oxidase, central domain 139 189 - -
Pvu7g2076 630 SUPERFAMILY Kelch motif 20 222 IPR015915 GO:0005515
Pvu7g2076 630 Pfam Galactose oxidase, central domain 231 279 - -
Pvu7g2076 630 Gene3D - 172 344 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2076 Pvu-Chr7 44119126 44123199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2076 6 413 Acyl Lipid Metabolism Gene Families AT3G05420 29.206 7.82e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2076 K20285 - gmx:100787222 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2076 7 44119126 44123199 Pvu7g2076 7 44119126 44123199 ECH
Pvu1g2325 1 48652548 48656593 Pvu7g2076 7 44119126 44123199 PCT