Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2056 ATGAGGACAGGGTCTTCTATTTTTTCCCTATTGCATTTATCCAGATGCAGCATGCACGGCTTAGCCAATTGTAGGGAAGATGAAGCATTATGTAGTTTTATCAAGATTTATGGAAACAACTCTAGAATCAGACTACTTGGTTCTAGAATTTATGGGCTTGAGAGAGGATTTGCTACTAAGTGGACTAAAAGACTTGTAGCTACAAGAGCAGAAGGAAGTAAACAAACCACTTGGAACACCGAATCAAAACGTACCAAGCATGAAATTTCTAGAGAGGAGATTTTACCAAATGCTACAGTGAATGTAAATATGACACAGCTAGATCAGTTCCAGAAAATTCAGTGGCCTGAAGTACAAGAAATTGCTCAGTATAAAAACTTATCTGACCTACTCACTGTTATTGTTTTTGATCTTGAGACTACTGGGTATAGCAGAGTAAAGGACCGGATCATTGAGATTGCACTTCGAGATCTCCAAGGTGGTGAGGACAGCACTTTCCAAACTCTTGTAAATCCTCAATGCCATGTGCCTAATTCACATATTCATGGAATTGCTACCCATATGGTGAACCGAACTGATGTGCCAAGGATGGAAGAACTGGTACCCATCTTGTTGCAGTACATAAAAAGGCGAGAGAAAAATGGTGGATATGTGTTATGGGTTGCACACAATGCTCGCACTTTTGATGCACCTTTCCTCATCCAGGAGTTCATTCGATGTTCCATGGAGATTCCTGAGAATTGGGTGTTTCTGGACACCCTTCCTCTGGCACGTGAACTGATGAAGTCTGGTGGAACAAACCTTTCTTCAGCGTCACTGGGTGCCCTTGGTGAGTTTTACAGAGTTGAAGTGGATGGATCAGCCCACAGAGCCATGGTAGATGTGAACACATTATGTCAGATACTTCCATTGTTGACCACTGATCTGAAGTTAACTTTGTCCAGCCTTGTCAAAAAATCGTTCAATTTATCGGATTGGATGAAGGCTAAGAAAGGAAAGAAGTGA 1005 0.4149 MRTGSSIFSLLHLSRCSMHGLANCREDEALCSFIKIYGNNSRIRLLGSRIYGLERGFATKWTKRLVATRAEGSKQTTWNTESKRTKHEISREEILPNATVNVNMTQLDQFQKIQWPEVQEIAQYKNLSDLLTVIVFDLETTGYSRVKDRIIEIALRDLQGGEDSTFQTLVNPQCHVPNSHIHGIATHMVNRTDVPRMEELVPILLQYIKRREKNGGYVLWVAHNARTFDAPFLIQEFIRCSMEIPENWVFLDTLPLARELMKSGGTNLSSASLGALGEFYRVEVDGSAHRAMVDVNTLCQILPLLTTDLKLTLSSLVKKSFNLSDWMKAKKGKK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2056 334 Pfam Exonuclease 134 302 IPR013520 -
Pvu7g2056 334 CDD DEDDh 134 295 - -
Pvu7g2056 334 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 334 IPR040393 GO:0008408
Pvu7g2056 334 SMART exoiiiendus 132 311 IPR013520 -
Pvu7g2056 334 Gene3D - 131 320 IPR036397 GO:0003676
Pvu7g2056 334 SUPERFAMILY Ribonuclease H-like 132 305 IPR012337 -
Pvu7g2056 334 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2056 Pvu-Chr7 43949234 43952069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2056 - - vra:106770524 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2343 1 48811605 48815341 Pvu7g2056 7 43949234 43952069 ECH
Pvu7g2056 7 43949234 43952069 Pvu7g2056 7 43949234 43952069 ECH
Pvu1g2343 1 48811605 48815341 Pvu7g2056 7 43949234 43952069 PCT