Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2000 ATGTTTAACTGGCCAAGAGATGTTAGTGCTTTTAATGCATTCAATTGGAAACGTCAAGGTGAATCATCTGAGAGAAAAGGTTTACTTCAGGATGTTCCAGCAGAGATTGAAATGTCGGATTATACAAGCATCCCAATTGCAGGTAGTGAGAGCCCTTCAAGCCTACTTGATGGTGAAAGCCTTAATGTGCAACCAATTGCCGATTTGGATTTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTCGGGTTCACCATATGTCTTTCAGGATTTATCTTTCTATATGTTGACTGGAATGGACTCCGTAATGCAAAGTGTGGAATGAATGCAGTTGAATCTGGAAGGGAGCCTTGTGATCTTGTTAAGGAAGCTCTTCATCAACACCCTTTAACCCCATTAACTTTAGGCAGAGCTATTATTGTTGGATACCTGGGAATATTTTTTGTCTTTTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTGAAGCATACACTGAAAATCCGTCAGTTTTACTACAACAATCTTCGTCTAACAGATAACGAAATTCAAACTATGCCCTGGGCTACAATTCTTGAAAAGACTGTTAATTTGCAAAACTCACAACAACTCTGTGTGGTAAAGAATCTTTCTGCTCATGACATTGTGATGAGGTTGATGCGAAAGGAGAACTACTTGATTGGGATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCTAAGTGGGTTCCAGGTGCTGGATCAACAGTGAAATCTGGTCCTGACGGAACACAATATTGTGCAATACTAACCAGGACCCTTGAGTTGGCTTTAAATTGGTGCATCCTGCAAAGCATGTTTGACTGGAACTTTTGTGTCAGAAAGAATTTTGTGTCAGATTCAAAGACATTAAAGAAAAGGCTTATGGTAGTAGGGATTGCAATGTTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGCACATCTCTTTCTGAGGTACGCTGAGCAATTTTATAATCAACCTAGCACAATATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAATGAGGTTGATCATTTGTTCAAGCATCGGATGAATACCAGTGTATTTCATGCTTCTAACTATATCAAGCAATTCCCTTCACCAATCATATCTGTGATTGCAAAATTCATCTCATTTGTATCTGGTGGCTTTGTTGGGATTCTGATCAGCCTTGCTTTTTTAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGCTGTGGTATGCTGCTATTTTTGGAACTATAAATGCTCTTAGATGGGCTGCATTTACAGATAAGGAGCTTTTAGTCACTGATCCCAAAGGAACAATGTCAACAGTAGTTGACCATACACATTATATGCCCAAGAGATGGCGGGGCAAAGAAAGTACTGAAATGGTCCGGAATGAGTTTGAAACCTTATTCCAGTATAGTGTGATGATGTTACTTGAGGAGATGACTTCAATTTTCGTTACTCCATTCTTGCTTTTGTTTGTTGTCCCAGAGCGGGTTGATGATATCTTGCAGTTTATTGAAAATTATACTGTATATGTCGAAGGTGTTGGTGATGTTTGCAGCTTTAGTGTCTTCAATTTTCAAGAGCATGGAAACAGAAGTTATGGCTCTCCATTTAATGTGCCTCGTAGCCAGAGGAGTTCTCAGGGGAAGTTGGAGAAATCATTCTTGAGCTTCCAGAGTAGTTACCCTTATTGGGAGCCAAATGCTGAGGGAAAGCAGTTTCTACAAAATCTGAGAACATTCAGAGACAAAAAATTAACAGACCATGTAAACAGACATGGATTTGACCCCCTCAGACCATGGAGAGATGATGCCAATATGGGAAGCTATAGAGACAGAAACAGTTTTACATCCAGGGGAATGTCACATGGTACTTTTGTGACCAGCAATCGAAACAATCACCCTTATCTTTTAGATTGGTACTACATTTCCCAACCTCGTTATGCAACTCCCAGACACGTTTCAACTAATCATTCTGAAGTAACTCAGCATCGTTCCCCAGATAGGATGCTTTCCTTATTGGAACAAAATGAACATGAATATGAAGAATACATGAACAAGTTTTGCAATGAACGTGCTGGTTCATATCTAGGGGCTTCCACATCAACTTCCATCTTCAAGGAAAGCCTAATTGATGATCCACATTCCATTGATGTGCCTCTCACTACCAGGAGTCATTGGTGGCATAGAAGTCAACCCCGGATTGAACATGATCAGACGAGCTTTATGGATCCACCGGATTTCAATCACCAAAGAACATACAATTACCACGATAAATTTTCCGATAGAGGGTCAGAAGATCAATGTCAGGAACCTAGGTTTTTGGAGCCACCAGATTTCAATCACCGAACACCAGACAATTACCATGATAAGTTTTCTGATAACTGGCCAGAAGATCACGATGAGAAGCAATACTTGTACGGGGGAGATTATCACGAGCAATCTAGTATGGCACAAGCAGATAATTTAGATGCAAGAGAATTGAGTCTTCATTTTGGTGATGTTTATTGCAGCCCCCCCTAG 2622 0.4027 MFNWPRDVSAFNAFNWKRQGESSERKGLLQDVPAEIEMSDYTSIPIAGSESPSSLLDGESLNVQPIADLDFFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICLSGFIFLYVDWNGLRNAKCGMNAVESGREPCDLVKEALHQHPLTPLTLGRAIIVGYLGIFFVFWIFCFLRFFVQLKHTLKIRQFYYNNLRLTDNEIQTMPWATILEKTVNLQNSQQLCVVKNLSAHDIVMRLMRKENYLIGMLNKGVLAFPISKWVPGAGSTVKSGPDGTQYCAILTRTLELALNWCILQSMFDWNFCVRKNFVSDSKTLKKRLMVVGIAMFLLSPFLVIFMLAHLFLRYAEQFYNQPSTISSRRWSNLSRWVFREFNEVDHLFKHRMNTSVFHASNYIKQFPSPIISVIAKFISFVSGGFVGILISLAFLEESLLEGHIFGRNLLWYAAIFGTINALRWAAFTDKELLVTDPKGTMSTVVDHTHYMPKRWRGKESTEMVRNEFETLFQYSVMMLLEEMTSIFVTPFLLLFVVPERVDDILQFIENYTVYVEGVGDVCSFSVFNFQEHGNRSYGSPFNVPRSQRSSQGKLEKSFLSFQSSYPYWEPNAEGKQFLQNLRTFRDKKLTDHVNRHGFDPLRPWRDDANMGSYRDRNSFTSRGMSHGTFVTSNRNNHPYLLDWYYISQPRYATPRHVSTNHSEVTQHRSPDRMLSLLEQNEHEYEEYMNKFCNERAGSYLGASTSTSIFKESLIDDPHSIDVPLTTRSHWWHRSQPRIEHDQTSFMDPPDFNHQRTYNYHDKFSDRGSEDQCQEPRFLEPPDFNHRTPDNYHDKFSDNWPEDHDEKQYLYGGDYHEQSSMAQADNLDARELSLHFGDVYCSPP* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2000 873 Pfam Autophagy protein ATG9 63 558 IPR007241 GO:0006914
Pvu7g2000 873 PANTHER AUTOPHAGY-RELATED PROTEIN 9 806 873 - -
Pvu7g2000 873 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 804 - -
Pvu7g2000 873 PANTHER APG9 AUTOPHAGY 9 806 873 IPR007241 GO:0006914
Pvu7g2000 873 PANTHER APG9 AUTOPHAGY 9 1 804 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2000 Pvu-Chr7 43257363 43263137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2000 K17907 - gmx:100779344 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2000 7 43257363 43263137 Pvu7g2000 7 43257363 43263137 ECH
Pvu1g1658 1 41950751 41958196 Pvu7g2000 7 43257363 43263137 PCT