Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1658 ATGTTTAGCAGGCCAAGGGGTGCCAGTGCTTTTAGTATATTCAAATGGAAACAACCAGGTGCATCATCTCTGACAGCAGGTTTACTTCAGGAAGATCAGCCAGAGATTGAATTGTCTGATTATGGAAAGATTCCTAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGACAGCCTAAATGTAGAACCAATTTCTGATTTGGATCTATTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTATGGTGCATCATTATAAAATGGATTGTTGAGCTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGACTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGGATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCCTTAACCCCACTAACAATCACGAAAGCTATTATTGTTGGATACTTGGGATTATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTGGAAACCCGGCATTTTTACTACAACAGTCTCCATGTTACTGACAGTGAAATTCAAACCATGCCGTGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCAACAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAGAACTACTTAATTGGAATGCTCAACAAAGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCAGGTGCTGGTCCTACAATGAAATCTGGTTCTAACAGAGCACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAGGTGATTTTGTGTCAAATCCAAAGACATTACAAAGAAGGCTCATGGTAGTTGGATTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTGTATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCTAGCACTGCATCATCTCGAAGATGGTCAAATCTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCATGCTTCTGATTATCTCAAGCAATTTCCTTCACCAATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTCGAAGAGTCTCTACTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACCAATGAGCTTCTGGTTTTAGATGCTGAAGGAGCTATGTCTATGGTGGTTCAGCATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAATCTGTCTGTGTTGAGTTTGCAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCTTTTCATCGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCTCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCTCAAGGGAAGATGGAGAAATCATTGCTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAGTGCACAGGGTAAACAGTTTTTGCTAAATCTTAGAAAATTCAAAGAGGAAAAGTTACCAGTACATGGAAACATACATGCAGCTTCCCCTCCTAGAATGTGGAGGGGTATTTCCAACATGGGAAGCAATATTGGGGACAGAAACAGGTTTATGTCCAGGGAAATGCCACACAGTACTTTTTTAACTGGCAATCACTTGGGTTCTCTGTGGTTGATTGAAGCCAACCAAAACAATCATCCCTATCTCCTTGATTGGTACTATACATCTCGATCTTATGACGTAAGTCAAGGAGATGATCCTTCAGAACCGTTTGGAGTAATAGAGTCTAGAGAGCTTTGGATTCCCCCCAATACGACACACAATGAAAGTAGGTATGAGGAATACTCAAATGAGAATCGTCCAGGTTGGGCTCCATTTCATCTTGCGACTTCCACATCCGTTCCCATTTTCAGGGAAAGCTCAATTCAGGATCAAAGTTATAATGCACTGACCCATACTACCAGCAGTCATTGGTGGAATAGAAGTCACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCATTCAGGAAAGATATAATTATCCTGATAAGTTTTCTGATAGAGGGTCAGAGGATGAAGATCGTGAACAACGCTTGTACTCTAGAGATAATCACAGATTATCTAGAACATACGCAGATGACTTAGGGGCTGGGGAATTTAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACACCACCTGCAAGCTTTTGA 2574 0.413 MFSRPRGASAFSIFKWKQPGASSLTAGLLQEDQPEIELSDYGKIPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTITKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLETRHFYYNSLHVTDSEIQTMPWATILEKVVLLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTMKSGSNRAQNRVILTKTLEWTLNWCILQSMFDRNFCVRGDFVSNPKTLQRRLMVVGFAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITNELLVLDAEGAMSMVVQHTHYLPKRWRGKESTESVCVEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILLFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGKQFLLNLRKFKEEKLPVHGNIHAASPPRMWRGISNMGSNIGDRNRFMSREMPHSTFLTGNHLGSLWLIEANQNNHPYLLDWYYTSRSYDVSQGDDPSEPFGVIESRELWIPPNTTHNESRYEEYSNENRPGWAPFHLATSTSVPIFRESSIQDQSYNALTHTTSSHWWNRSHAQQGGQNQTSFFEPPDFIQERYNYPDKFSDRGSEDEDREQRLYSRDNHRLSRTYADDLGAGEFNLHFDDIYSRPPETPPASF* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1658 857 MobiDBLite consensus disorder prediction 798 819 - -
Pvu1g1658 857 PANTHER APG9 AUTOPHAGY 9 1 857 IPR007241 GO:0006914
Pvu1g1658 857 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Pvu1g1658 857 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 857 - -
Pvu1g1658 857 MobiDBLite consensus disorder prediction 797 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1658 Pvu-Chr1 41950751 41958196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1658 K17907 - gmx:100777405 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1658 1 41950751 41958196 Pvu1g1658 1 41950751 41958196 ECH
Pvu1g1658 1 41950751 41958196 Pvu7g2000 7 43257363 43263137 PCT