Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1972 ATGGCCACACAAGTGACACCAGTAGCAGCATTTCTTCTGCTTCTTCTTATTCTCCCTTTCTCCACTTCTATCTCTCACTCTCACCGATCCGCTGCCATCAACCTCTTCGCTACCTCTCCCGCAAGCTTAGAAGACGCTTACGAGGCGCTTAGAGTGTTTGAGATTATCGGATTCGAAGAGAAGAAGACTCACGTGAGCGGGGACACGTGTCAGAAAGTGTTGGAAAATCTAAACTCGGCTTCCCCTCTCAAGGATTTGTTCTATGCCTTGAAAGTTAACGCCATTTTAAAATGCGATGTTAATAGGGAGGCTTTAAAGGATATTGCTTCAAGACTTAAGGCTACTGTTCATGATGCGAGCACTTTGCTTGACATATACTACTCGATTGGAGGCTTGGTTCTTATAAAGGATCAGGATTCCAATGTTGATCCGTATCTTGCTCATGTTGATGGGGTTTTTCAATCAATCAAGGCTCTTAGTCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCGGAGTCCAGTACCTTTGCTGCTGGATTAGCAATTGAAGCACTTGCAGGAGTGATTTCACTAGCATCTTCCGAAATTGATCAGTCTAAGGTCAATATAGTGAAAAAGGACATAGTAAAGCTTTTTGATTTCATTGAGAAATATGATGATGGAACCTTTTATTTTGATGAAAAATTTGTTGGTGGAGATGAGCAACGGGGTTCTCTTGCCGCAACTTCTTCAGTTGTTAGAGGGTTTACTGCATTTGCTGCTGTAACTTCTGGAGAAATAAATCTTCCAGGGGATAAAATATTGGGTTTGGCAAAATTTTTCTTGGGCATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAGTCGTTAGCTTTTCTAGAGACCAACAGGATTTCCATTCCATTGATATTGTCACTCCCCGAAACAGTTTATTCATTGACCAAGAAAGGCCAGCTTAAGGTTAAGGTGAATACAGTGCTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGCCCGTGCTTTTAGAACTGGTGCAAAAGATTCAGCTATTATTGACAGCAAGGAGCTCTGGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTCCCTAAGAACGTGGAGGTGGGAACGTACGTGTTTGTTTTTGAGATTGTGCTTCATGATTCTGGCAGTGAAAAAGTTTATGCAACTGGAGGACAAATTCATGTACCAATATATGTCACTGGGTTTATTAAAGTCAGCAATGCAGAAATCACTGTTGTGGACAGTGATCTTGGGCGTGCCCAATCCCAGAAAAAGCTAGATTTGGCTGGAAATGATGCAGTTTCACTCTCAGCTAACCACTTGCAGAAGTTGAAGTTTTCTTTCCAATTGACAACACCTAATGGTCATGTTTTTAAGCCGCATCAGGCATTTTTGAAGTTGAGACATGAGACAAAGATTGAACACATCTTTGTGGTTGGAAACACCGGCAAGAAGTTTGAGATAATTCTTGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTGTCAGGCAGATATGACATTGAGTTGACTGTTGGTGATGCCGTCATGGAGAACTCTTTCTTACGGCTACTTGGCCATCTCGATTTAAATCTTCCAGAAGCACCTGAGAAAGCAGCTCGTCCTCCATCCCCACCTGTTGACCCTTATTCAAGATATGGGCCGAAAGAAGAGATTACACATATATTCAGGGTTCATGAAAAGAGACCACCCCAGAATCTTTCTCTTATTTTCTTGGGTTTAATCCTTTTGCCAATCATTGGCTTTTTGGTTGGGTTATTGCGATTGGGAGTGAACCTAAAGAATTTCCCTGGTTCAACAGTACCAGCTACATTTGGGATCCTTTTCCATGTTGGTATTGCTGGGGTTTTGTTACTTTATGTGCTTTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAGGCATTTGGTCTTTTGGGAGCTATTCTGATGTTTGTGGGGCACAGAATTCTTTCTCATCTCGCTTTGACATCAGCCAAATTGAAATCTGCATAA 2061 0.4187 MATQVTPVAAFLLLLLILPFSTSISHSHRSAAINLFATSPASLEDAYEALRVFEIIGFEEKKTHVSGDTCQKVLENLNSASPLKDLFYALKVNAILKCDVNREALKDIASRLKATVHDASTLLDIYYSIGGLVLIKDQDSNVDPYLAHVDGVFQSIKALSQSDGRWRYSSDNPESSTFAAGLAIEALAGVISLASSEIDQSKVNIVKKDIVKLFDFIEKYDDGTFYFDEKFVGGDEQRGSLAATSSVVRGFTAFAAVTSGEINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLETNRISIPLILSLPETVYSLTKKGQLKVKVNTVLGSAAPPLTVKLARAFRTGAKDSAIIDSKELWYDQESGFHVLDAFPKNVEVGTYVFVFEIVLHDSGSEKVYATGGQIHVPIYVTGFIKVSNAEITVVDSDLGRAQSQKKLDLAGNDAVSLSANHLQKLKFSFQLTTPNGHVFKPHQAFLKLRHETKIEHIFVVGNTGKKFEIILDFLGLVEKLFYLSGRYDIELTVGDAVMENSFLRLLGHLDLNLPEAPEKAARPPSPPVDPYSRYGPKEEITHIFRVHEKRPPQNLSLIFLGLILLPIIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAGVLLLYVLFWLKLDLFTTLKAFGLLGAILMFVGHRILSHLALTSAKLKSA* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1972 686 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 22 686 - -
Pvu7g1972 686 Pfam Oligosaccharyltransferase subunit Ribophorin II 16 677 IPR008814 GO:0006487|GO:0008250|GO:0016021
Pvu7g1972 686 PANTHER RIBOPHORIN II 22 686 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1972 Pvu-Chr7 42813486 42821646 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1972 K12667 - gmx:100814831 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1972 7 42813486 42821646 Pvu7g1972 7 42813486 42821646 ECH
Pvu1g1679 1 42296627 42305733 Pvu7g1972 7 42813486 42821646 PCT