Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1679 ATGGCCAGATACCTAGGAGGATTACTGGTGCTGCTTTTCGCTGCTTCGATCTGCGGAGCCGTCACGATTCCTGGCCCCGTCTCTGATGCTCACCGTTCCGCCGCATCGGAGCTCTTCGATGGCTCATTTTCAAGTTTAGAAGAGGCCTATGAGGCCCTCAGAGTGTTTGAGATTCTTGCGATTGGGAATAAGCCTGATGTGAGCGCAACCGCGTGCAAGAAAGTAGTGGAAAATCTTGGGTCGTCATCCCCTGTGAAGGATTTGTTCTATGCATTAAAGGTTAATGGCATATTAAAATGCAAGGTTAATGCGGATGTTTTCAAGGATATTGCTGTGAGACTTAAAGCCACTGTCACTGATGCGAGCACTTTGGTTGACATGTACTATTCAATAGGAAGTTTGGTTCTTATAAAGGATCAGGTTTCTGATGTTGACGTGCTTCTTGCTGATGCTGATGGAACCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGGTTAGCACTTGAAGCACTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCTGTCTAGGGTGAAAACAGTAAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGAACCTTCTATTTTGATGAGAAATTTGTTGGTGGAAGTGAGCATCAGGGTTCTCTTTCCACAACTTCATCTGTTGTTCGAGGGGTTATAGCATTTACTTCTGTAATTTCTGGAAAAGTAAATCTTCCAGGGGATAAAGTGTTGGGTTTAGCAAAATTTTTCCTGGGTATTGGAATCCCAGGTGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAAAACAACAGGGTTTCCATCCCATTGGTACTGTCACTTCCTGAAACAGTTTATTCATTATCCAAAAGAGATCAGCTCAAGGTTAGGGTGAATACAGTACTTGGTTCAGCTTCACCACCTTTAACAGTTAAGCTTGTCCGAGCTTTCCGCTCTGATGCTAAAGATTCAGTTATTATTGAGAGCAAGGAGCTCCAATATGATAAAAGTAATGGAATTCATGTCTTGGAAGTTTTCCCAGACAATGTGGACGTGGGGACTTACGTGTTTGTTTTTGAGATTGTACTTCACGATTCTGCTGGTGAAAAAGTTTTTGCTACTGGAGGTCAAATTCATGTACCAATATATGTCACTGGCATTATTGAGGTCAGCAACGCAGAAATTGCAGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAAAGCTAGATTTGGCTGGAAATGTTGTTGTTGAACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGAAAACACCTCATGGTCATGCTTTTAAGCCTCATCAGGCATTTTTTAAGTTGAAGCATGAGACAAAGCACGAACACATATTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATTGTTCTGGATTTTCTTGGTTTGGTGGAGAAGTTTTATTATCTCTCGGGCAGATATGACATTGAGCTGACAGTTGGAGATGCTGTCATGGAGAACTCTTTCTTGCGGCCGCTTGGTCATGTTGATCTAGAACTTCCAGAAGCTCCTGAGAAGGCAGCGCGTCTTCCTCCACTCCCTGTTGATCCTTACTTAAGATATGGTCCCAAAGCAGAGATAGCCCATATATTCAGGGCTCCTGAAAAACGACCACCCCAGAACCTCTCTCTTACTTTCTTGAGTTTGATTCTTCTGCCATTTATTGGCTTTTTAGTTGGGCTGTTACGCTTGGGGGTAAACTTGAAAAATTTTCCGTCTTCAGCAGCACCTGCTGCATATGCCATCCTATTCCATCTCGGCATTGCTGCAGTTCTATTGCTCTATGTACTTTTCTGGTTGAAGCTGGACTTGTTTACTACACTCAAAACTGTAGGACTTTTGGGAGTTTTTCTAATGTTCGTGGGGCACAGAATTCTCTCCCATCTCGCTTCAACTTCATCCAAGTTGAAGTCTGCATGA 2067 0.4253 MARYLGGLLVLLFAASICGAVTIPGPVSDAHRSAASELFDGSFSSLEEAYEALRVFEILAIGNKPDVSATACKKVVENLGSSSPVKDLFYALKVNGILKCKVNADVFKDIAVRLKATVTDASTLVDMYYSIGSLVLIKDQVSDVDVLLADADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDLSRVKTVKNDILKLFDSIEKYDDGTFYFDEKFVGGSEHQGSLSTTSSVVRGVIAFTSVISGKVNLPGDKVLGLAKFFLGIGIPGDAKDFFNQVESLALLENNRVSIPLVLSLPETVYSLSKRDQLKVRVNTVLGSASPPLTVKLVRAFRSDAKDSVIIESKELQYDKSNGIHVLEVFPDNVDVGTYVFVFEIVLHDSAGEKVFATGGQIHVPIYVTGIIEVSNAEIAVLDSDLGSVETQKKLDLAGNVVVELSANHLQKLRFSFQLKTPHGHAFKPHQAFFKLKHETKHEHIFVVGNTGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHVDLELPEAPEKAARLPPLPVDPYLRYGPKAEIAHIFRAPEKRPPQNLSLTFLSLILLPFIGFLVGLLRLGVNLKNFPSSAAPAAYAILFHLGIAAVLLLYVLFWLKLDLFTTLKTVGLLGVFLMFVGHRILSHLASTSSKLKSA* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1679 688 Pfam Oligosaccharyltransferase subunit Ribophorin II 8 680 IPR008814 GO:0006487|GO:0008250|GO:0016021
Pvu1g1679 688 PANTHER RIBOPHORIN II 1 688 IPR008814 GO:0006487|GO:0008250|GO:0016021
Pvu1g1679 688 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1679 Pvu-Chr1 42296627 42305733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1679 K12667 - gmx:100780415 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1679 1 42296627 42305733 Pvu1g1679 1 42296627 42305733 ECH
Pvu1g1679 1 42296627 42305733 Pvu7g1972 7 42813486 42821646 PCT