Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1963 ATGTCCGGCGGCAAGGTGAAGGGCATTCTGAAAGGCTTTAGATACTTTACTCAAATATTTGAGGGTGAAAAAGAACAAGAAATTCAGATCGGATTTCCCACAGATGTAAAACACGTGGCTCATATAGGGTGGGATGGACCCTCTGTAAATTCTCCCAGCTGGATGAACGAATTTAAAACTTCTCCAGGTGTAGATGTTCAAAATAAAGGACAAGAGAATGGAGTGAAACGTGTACCCGAAGAACCAAAGAGAAGAAGTAGTCGAGATTCAGCAGATTTACCGAAGGCGTCTAAAAGACAATCAACGGGTCTGACGGATTCTCCCGTAAGAGAAAAGACAACCAAACCGCGAACAAGGAAATCTTCCAACAAGCCCAAAGAAGAGCCCCACCCGACCCGAATACCCGAATATTCGGATCCATATCCCCTACCTTCCACCCTACCCTCACCGGATAATAATATTCCTAAAAAGACCCGTCGCCACAAACCAAAGGACACTTCTAGTGGCGTCCCATCCAAATTAAGATCCAAAGCCCAACTTACTTCCGATTCCGGATCCCCGGCCCAACCCAAGCCCAGGAACACCCCAGTCACCACCTTTGATCAAGCTGAACATGATCTTTTGCTGTAA 630 0.4619 MSGGKVKGILKGFRYFTQIFEGEKEQEIQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGVDVQNKGQENGVKRVPEEPKRRSSRDSADLPKASKRQSTGLTDSPVREKTTKPRTRKSSNKPKEEPHPTRIPEYSDPYPLPSTLPSPDNNIPKKTRRHKPKDTSSGVPSKLRSKAQLTSDSGSPAQPKPRNTPVTTFDQAEHDLLL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1963 209 CDD CRIB 28 61 - -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 49 68 - -
Pvu7g1963 209 SMART PBD_5 30 61 IPR000095 -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 169 201 - -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 43 209 - -
Pvu7g1963 209 Pfam P21-Rho-binding domain 29 63 IPR000095 -
Pvu7g1963 209 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 6 181 - -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 74 95 - -
Pvu7g1963 209 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 135 149 - -
Pvu7g1963 209 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 181 IPR044510 -
Pvu7g1963 209 Gene3D CRIB domain 24 73 IPR036936 -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 154 168 - -
Pvu7g1963 209 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1963 Pvu-Chr7 42725949 42727216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1963 - - vun:114192631 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1963 7 42725949 42727216 Pvu7g1963 7 42725949 42727216 ECH
Pvu1g1684 1 42356951 42358389 Pvu7g1963 7 42725949 42727216 PCT