Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1684 ATGTCCAACAACAACAACAAGGTGAAGGGTCTCCTAAAAGGCCTAAGATTCATTTCTCAGATATTCGATAATGACAAAGATTCAGACATTGAGATTGGTCAGCCCACAGATGTAAAGCATGTAGCACATATTGGATGGAATGGTCATGATCCCTCTGAAAACAATCCCTCCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATGCATCTGCATCTCCAAATCATAAAGAAGACATTCATAGCAATGAATCCAATAGTTCATTGCAAAGGAACTCTGCAGATTTAATGGAAAGAAGTTCAAGATCTGTGAAAAGTCAAGGGTGTGATGATGCGAGGCACTCAATCGACTTGGCTAAATCTAAACGACAATCACATTCAATGGGGACTGTGAGAGAGTCTCAGACGAAGGAAAGATCAGACAGACCAAGACGTACAAAAAGGTCAGCAAAATATTCACAACCAAATGATTCATGTAATGCATCCAAAGACACCGACCAAGACATGCACACGGGTGATTCCCTCCAACAAGACAGTGATTTGGCGCCTAAAAAAACACGTCCCAAGATGTTAAAAGATGGTTCCAATGTTGGTGGTGGCTCAGCCAGAACAAGATCAAAAGCAAAGTCTAAGGATTCCCAACACGAAGGCCATGGTAGACGTAGTTGCTCCAAATTAACTCACAAGCAGGAGTCTATTGAAGAAGATGGACATTTTGAGAGAGAGTCTAGAGAAAGTACACTAAATAGTAACCTAAATTAG 759 0.4124 MSNNNNKVKGLLKGLRFISQIFDNDKDSDIEIGQPTDVKHVAHIGWNGHDPSENNPSWMNEFKSVPGNASASPNHKEDIHSNESNSSLQRNSADLMERSSRSVKSQGCDDARHSIDLAKSKRQSHSMGTVRESQTKERSDRPRRTKRSAKYSQPNDSCNASKDTDQDMHTGDSLQQDSDLAPKKTRPKMLKDGSNVGGGSARTRSKAKSKDSQHEGHGRRSCSKLTHKQESIEEDGHFERESRESTLNSNLN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1684 252 CDD CRIB 30 64 - -
Pvu1g1684 252 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 7 221 IPR044510 -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 204 244 - -
Pvu1g1684 252 ProSiteProfiles CRIB domain profile. 32 45 IPR000095 -
Pvu1g1684 252 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE 7 221 - -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 50 75 - -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 131 150 - -
Pvu1g1684 252 Gene3D CRIB domain 26 79 IPR036936 -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 103 120 - -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 84 102 - -
Pvu1g1684 252 MobiDBLite consensus disorder prediction 43 252 - -
Pvu1g1684 252 Pfam P21-Rho-binding domain 31 78 IPR000095 -
Pvu1g1684 252 SMART PBD_5 32 65 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1684 Pvu-Chr1 42356951 42358389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1684 - - gmx:102666244 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1684 1 42356951 42358389 Pvu7g1963 7 42725949 42727216 PCT