Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1949 ATGGGTATGATCGGAAAAAGTTCCTCTCTACCCTTTCTTTTTTTCTTTACTGTTTTCTGGTTCCTTCATCTTCCCATGTCAGATGCAGAGGAAACAAACTTGGTTTTCAAGGGCTGTGCAGAGCAGAAACTACAGGACCCAACTGGGATATACTCACGGAACCTGAAATCCCTCTTGGATTTTTTGGTGTCACAATCTGAAAAAAAGGCCTTCTTCACCACAACCTCTGGAGAAGGCCAGAATGTGATCATGGGTCTGTATCAATGCCGAGGGGACCTCTCAAACACTGCTTGCTGCGACTGCGTGAGCAAGATTCCTGAGATGCTTGAAAACTTGTGTGGCAAGGTGGTAGCTTCGCGTGTTCAGCTTTCTGGATGCTACCTGAGGTATGAAATTGTTGGATTCACGCAGGTGCCTGAGACTCAATTGCTTTACAAGGTTTGTGGTTCCAAGAAAGATAGTTCTGATGATGGGTTTGACGAGAGAAGGGACTCTGCATTTGGTATGGTGGAAAGTGGTGTGAAAAATGCTGGAAACTTGTTTTACACAGGGAGCTATCAGTCTCTCTATGTGTTGGGCCAGTGTGAGGGTGATTTGGCCAAAGATGATTGTGGGGATTGTCTGAAGAGTGCTGAGGATCAAGCCAAAGCTGAGTGTGGTGACCCTATTTCTGCACAAATTTATCTACACAAATGCTTCATTAGCTACAGCTTTTATCCTAAGGAAGGAAGGTCATCTTCTGCAGGATCACTGGGGCAACAAGAGACACAGAAGACTGTAGCTCTTGCAGTGGGAGGGTTTGCAGCTTTGGGTTTCTTAATTGCTTGTTTGTTATTTCTCAAGTCATTGCTGAAGAAAAAAGGTGAAAAGTATTGA 876 0.4452 MGMIGKSSSLPFLFFFTVFWFLHLPMSDAEETNLVFKGCAEQKLQDPTGIYSRNLKSLLDFLVSQSEKKAFFTTTSGEGQNVIMGLYQCRGDLSNTACCDCVSKIPEMLENLCGKVVASRVQLSGCYLRYEIVGFTQVPETQLLYKVCGSKKDSSDDGFDERRDSAFGMVESGVKNAGNLFYTGSYQSLYVLGQCEGDLAKDDCGDCLKSAEDQAKAECGDPISAQIYLHKCFISYSFYPKEGRSSSAGSLGQQETQKTVALAVGGFAALGFLIACLLFLKSLLKKKGEKY* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1949 291 Gene3D - 140 240 IPR038408 -
Pvu7g1949 291 Gene3D - 31 135 IPR038408 -
Pvu7g1949 291 Pfam Salt stress response/antifungal 154 238 IPR002902 -
Pvu7g1949 291 Pfam Salt stress response/antifungal 46 131 IPR002902 -
Pvu7g1949 291 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Pvu7g1949 291 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 288 - -
Pvu7g1949 291 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 9 288 - -
Pvu7g1949 291 ProSiteProfiles Gnk2-homologous domain profile. 141 241 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1949 Pvu-Chr7 42591922 42593342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1949 71 240 Receptor kinase-like Gene Family AT4G23140 29.444 3.98e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1949 - - gmx:100795002 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1949 7 42591922 42593342 Pvu7g1949 7 42591922 42593342 ECH
Pvu1g1704 1 42509483 42511018 Pvu7g1949 7 42591922 42593342 PCT