Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1704 ATGGGTACACTCAAAACAAAACACCACATTCACACGCTCCTCTTTCTCACTGCACTCTTCCTTTTCGTTTCCACACCCACCTCGCTTGCAGACAACACCAACTTGATCTACAAGGGTTGCGCAGACCAGAAACTGCAGGAGCCCTACACGCAGACTCTCAAACCGCTGTTATCGTCCTTGGTGGCAGAGTCGGCGCAAAAGGGTTTCGCCGCGACTACGCAGAACGCGCTCACCGGCGCGTACCAATGCCGGGGGGACCTCACCGCCTCCGACTGCCACAGCTGCGTGGCCAAGATTCCGGACATGCTGGGGCGCCTCTGCGGCGAGGCTTCTGCGGCGGCGCGCGTCCAGCTCAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGCAGGTTGCCGCGACGGAGCTTCTGTACAAGGTTTGTGGGGGGCGGAGGGTGGTCGACGGCGGGGGGTTCGAGGAGAGGAGGGACGCGGCGTTTGGGATGGTGGAGAACGGCGTGCAGAGCAGTGGGAGCTTGTTCTACACTGGGAGTTACCAGAGCCTCTATGTGTTGGGGCAGTGCGAGGGTAATTTGGGAAATGCAGATTGTGGGGCTTGTATCAAGAGTGCTGCGGAACAGGCTAAGGATCAGTGTGGCTACTCTATTTCCGCTCAGGTTTATCTTCAAAATTGCTATATCAGTTACAGCTTTTACCCCAATGGAGTTCCCACTTCATCTTCTTCCTCAGGATCAGAAGGAGGAGGAGGGCATCCACACACGGAGAGGACGGTGGCGCTTGCGGTGGGTGGGGTGGCGGCTCTGGGATTCTTGATTGCTTGCATGCTATGTCTGAAGTCGGTGTTAAAGAGAAGAGGTGGGAAGCGTTAG 876 0.5742 MGTLKTKHHIHTLLFLTALFLFVSTPTSLADNTNLIYKGCADQKLQEPYTQTLKPLLSSLVAESAQKGFAATTQNALTGAYQCRGDLTASDCHSCVAKIPDMLGRLCGEASAAARVQLSGCYLRYEVVGFKQVAATELLYKVCGGRRVVDGGGFEERRDAAFGMVENGVQSSGSLFYTGSYQSLYVLGQCEGNLGNADCGACIKSAAEQAKDQCGYSISAQVYLQNCYISYSFYPNGVPTSSSSSGSEGGGGHPHTERTVALAVGGVAALGFLIACMLCLKSVLKRRGGKR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1704 291 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 9 288 - -
Pvu1g1704 291 Gene3D - 134 235 IPR038408 -
Pvu1g1704 291 Gene3D - 32 130 IPR038408 -
Pvu1g1704 291 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 288 - -
Pvu1g1704 291 Pfam Salt stress response/antifungal 44 126 IPR002902 -
Pvu1g1704 291 Pfam Salt stress response/antifungal 176 233 IPR002902 -
Pvu1g1704 291 ProSiteProfiles Gnk2-homologous domain profile. 31 130 IPR002902 -
Pvu1g1704 291 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1704 Pvu-Chr1 42509483 42511018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1704 5 232 Receptor kinase-like Gene Family AT5G40380 27.500 1.89e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1704 - - gmx:100810212 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1704 1 42509483 42511018 Pvu1g1704 1 42509483 42511018 ECH
Pvu1g1704 1 42509483 42511018 Pvu7g1949 7 42591922 42593342 PCT