Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1833 ATGGAGAGGAGTAGGTTAAAGGCGTGGAAAGCAAATAAAATAAAATGTGGAGGTGTCTCCCTCTCTCATCCTTTACGAAAACCTAAATTCTGCACTGCAACGTTCTCCTCACATCCAAAACGCCACCGTTCTTCTTTTCTCTCCGTTCTCCGAAGCTTCGAGAATCACATTGCTGGGATGTCTGGAGAAGTTTATGATGGACAAGATGCTGGCTATGTGCCTGAGAACCCTGAGTTTCCGCAAAATCATTCTGAGGAACACGATGGAGGAAATGTGATTGATGACTCAGGGTTTCCGCAACTGCAGCCCGATGAACATGACGAGGCCAATTTGGCCGAGGATGCTGATGTTCCTGAAAACAATTTTGATGAGAATGATGGAGAAGGTTTGCCTGAAAACCCTGATTTTCCTCTGCAAGAACATGCTGAGGAACAACATGGTGAAGGAGACACGACTGAGAATTTTGACTCTGAGGAAAAACAGGGATCTCAGGAGGAGTTGAAAGGAGGTGAAGTAAAAAAATGGCCAGGGTGGCCTGGGGAGAATGTTTTCAGGATGTTGGTTCCTGTCCAAAAGGTTGGCAGTATTATTGGTCGTAAAGGCGAGTTTATTAGGAAAATTACTGAAGAGAGTAAGGCTCGTATAAAAATTCTTGATGGTCCCCCTGGAACTGCAGAAAGAGCTGTAATGGTTTCTGCAAAAGAAGAGCCAGATCGCACCATACCGCCCGCTGTGGATGGTTTGTTAAGGGTTCATAAACAGGTTGTCAATGTAGAGCCTCAACCTGCTGATGGTGCATCAGGTGGAGCACGCACCGTTGTTACAAGACTTCTAGTGGCAGATACTCAAGCAGGGAGCTTGATCGGGAAGCAGGGAGCCACTATAAAATCCTTTCAAGATTCCACAGGTTGCAATATACGTGTTCTTGGTTCAGAACACCTCCCAGTTTTTGCTCTGCGAGACGATAGTGTTGTTGAAATACAAGGAGAATCTTCAGGGGTTCACAAGGCTGTTGAACATGTTGCAGTTCATCTACGTAAATTCTTGGTTGACCGCAGCATAGTTGGTGTATTTGAAACACAGATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACATGGCCCACCACCACACCAACCTTGGGGCCCTCCTCAAGGTTTTCCAGCTCCCGGACCTGGTAGTGGTGGTGGACCTGCTTTCCCACCCAATCCTCAGTATATGCCCCCTTCACATAACTATGATAATTACTACCCTCCGGCTGACCTGCCTCCCATGGACAAGCACCTTCATCAGGGTCCTGCACCTGCCTATGGAAGAGATGCTTCCATCGGAATTCATTCATCCAGTGGGCAACCGCAACATTCTGTTGTGACTAAGGTCACGCAGCACATGCAAATTCCTCTGTCCTATGCAGATGCTGTTATTGGAGCATCAGGGACAAACATCAGCTACATCCGTCGTGCCAGTGGAGCAAGTATTACCATTCAGGAGACCAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGCACTGCTTCACAAATACAGGCTGCCCAACAGCTAGTGCAGAATTTCATGGCTGAAGCTGCTAGTGCAACTCAGGATCATATGGGGGGATCAATGAACCAAGGTTACAATTCCTATCCTACCAATGCTCCTGTCTACGCATCTCCGCCCTCAGGCGCTGCTGGCCATGCAGGCCATGTACCTTCCGCAGATTATGGACCCGTTTATGGCACCAATTATGGCTATTGA 1764 0.4785 MERSRLKAWKANKIKCGGVSLSHPLRKPKFCTATFSSHPKRHRSSFLSVLRSFENHIAGMSGEVYDGQDAGYVPENPEFPQNHSEEHDGGNVIDDSGFPQLQPDEHDEANLAEDADVPENNFDENDGEGLPENPDFPLQEHAEEQHGEGDTTENFDSEEKQGSQEELKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEESKARIKILDGPPGTAERAVMVSAKEEPDRTIPPAVDGLLRVHKQVVNVEPQPADGASGGARTVVTRLLVADTQAGSLIGKQGATIKSFQDSTGCNIRVLGSEHLPVFALRDDSVVEIQGESSGVHKAVEHVAVHLRKFLVDRSIVGVFETQMQRPDVRANQNVPHGPPPHQPWGPPQGFPAPGPGSGGGPAFPPNPQYMPPSHNYDNYYPPADLPPMDKHLHQGPAPAYGRDASIGIHSSSGQPQHSVVTKVTQHMQIPLSYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASATQDHMGGSMNQGYNSYPTNAPVYASPPSGAAGHAGHVPSADYGPVYGTNYGY* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1833 587 CDD PCBP_like_KH 274 342 - -
Pvu7g1833 587 CDD PCBP_like_KH 183 252 - -
Pvu7g1833 587 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 111 581 - -
Pvu7g1833 587 CDD KH-I 463 526 - -
Pvu7g1833 587 ProSiteProfiles Type-1 KH domain profile. 272 341 - -
Pvu7g1833 587 MobiDBLite consensus disorder prediction 72 175 - -
Pvu7g1833 587 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 111 581 - -
Pvu7g1833 587 Gene3D - 181 350 - -
Pvu7g1833 587 Pfam KH domain 463 526 IPR004088 GO:0003723
Pvu7g1833 587 Pfam KH domain 275 341 IPR004088 GO:0003723
Pvu7g1833 587 Pfam KH domain 184 236 IPR004088 GO:0003723
Pvu7g1833 587 MobiDBLite consensus disorder prediction 137 172 - -
Pvu7g1833 587 ProSiteProfiles Type-1 KH domain profile. 181 248 - -
Pvu7g1833 587 Coils Coil 518 538 - -
Pvu7g1833 587 MobiDBLite consensus disorder prediction 375 410 - -
Pvu7g1833 587 SMART kh_6 460 530 IPR004087 GO:0003676
Pvu7g1833 587 SMART kh_6 180 253 IPR004087 GO:0003676
Pvu7g1833 587 SMART kh_6 271 346 IPR004087 GO:0003676
Pvu7g1833 587 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 266 354 IPR036612 GO:0003723
Pvu7g1833 587 Gene3D K Homology domain, type 1 449 537 IPR036612 GO:0003723
Pvu7g1833 587 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 451 532 IPR036612 GO:0003723
Pvu7g1833 587 ProSiteProfiles Type-1 KH domain profile. 461 525 - -
Pvu7g1833 587 MobiDBLite consensus disorder prediction 365 456 - -
Pvu7g1833 587 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 173 236 IPR036612 GO:0003723
Pvu7g1833 587 MobiDBLite consensus disorder prediction 109 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1833 Pvu-Chr7 41495419 41504913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1833 K21444 - gmx:100818363 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1637 1 41634002 41638719 Pvu7g1833 7 41495419 41504913 PCT