Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1795 ATGAGGACTTTCATCACTGCAGAATCATGTAAAGAAGCACATCCTAATGCTTTAAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGAAAGCTTCCCAAGTTGTCATCACAGTCCTCCTCTTCATCAATAGAATCTCTAATCAAGGTCCCACAGCCACCTATACTCCCATTCTTCAAGCCTGTTGATTATGTGAAAGTTTTAGCTCAAATTCACGAAGAACTTGAGCTCTGCTCTCCGCAGGAGCAGTCAAATCTGTTTTTGTTACAGTACCAGGTCTTTAGGGGCATGGGGGATGTTAAATTGATGCGGAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAGATTATATTTGGGGCATGGCTGAAGTATGAGAAGCAAGGGGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGAACCCATAGATGTAGAATCTCATATTTCTTTTGATAAAGTTTTAATTTCCCAGGATAGTATTTCCATGAAGGGGAACCACACTTCACAATATGTAATCTTTACAATCGGAGATGAGAAGATAGTCTGTGATAGGCAAAAGATTTCCGAACTTTCAGCGCCATTTCATGCAATGCTAAAGGGGTGTTTCAGGGAGTCGCTTTCTGAGACCATCGATTTGTCTGAAAACAACATCTCTCCATCAGGTATGAGGGCAATAAGCTATTTTAGCTTGACGGGCAGTTTACTCGATGTTCCTCAAAATCTTTTGGTGGAGATATCAGTTTTTGCAAACAAGTATTGTTGCGAAAGACTAAAACTGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCACTGGAACTCATGGAATATGCTGTTGATCAGAATTCATCTGTCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGCGATATACCCAACTGCTTCAGTGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAGGAAGGAGTTGGAAGTCATGGTCGGGCCTGGTATATTTGCACTTTTTTGTTTCTTAAGCGAAGCTTCTATGAACCTTAGTTCTGCTTCAGACACAACAGCTCATTTCCTGGAACGGTTGGTTGATTTTGCTGAAAATGAAATGCAGAGACTTCTGGCATTTCATGAATTGGGATGTGTAAAGCTCTCAAGGAAAGAATATGATGAAGCCTATGGTCTTTTTGAGAGGGCTGCAGATGCAGGCCATATTTATTCCGTTGCAGGTTTAGCTAGACTGGACTCTATGAAGGGTGAGAAGCTTTTACCTTATCAGAAGATAAGCTCAGTCATTTCTTCTGGTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGCGATTTGAGGTGGAAAGACCTTGAGAAAGCAACCGAACTGGACCCGACTCTTGTATATCCCTACATGTATAGGTCTGCCACTTTAATGAGGACCGAGAATGTTCAAGGTGCATTGTCTGAAATCAACCGGATTCTTGGCTTTAAACTTTCATTGGAGTGCTTGGAACTACGGTTTTTCATCTATCTGGCCCTTGAGGACTACAAAGCAGCACTCCGAGATGTTCAATCAATTCTTACCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACCATTGCAGATTGTTGGGCACGATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTTTCTGTCATCTACCAGATGCTTGAATCTGATGTGGCCAAAGGTGTTCTATACTTCAGACAGTCGTTGCTTCTCCTCAGGCTCAGCTGTCCTGAGGCTGCCATGAGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGAGTTGTGTATGAGGGGTGGATCTTGTATGATTCAGGACATTACGAGGAAGGGCTCCAAAAAGCAGAAGAGTCTATTACTATTAAAAGGTCTTTTGAGGCCTACTTCCTAAAAGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCTTGTTCTTCAACTGTCATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCGGATAATCTGCGCAAAGGTCAGGCTCTGAACAATCTTGGAAGTGTTTATGTTGATTGCGGGAAACTAGACGCAGCAGAAGATTGCTATATGAAGGCCCTTAAAATCCAGCACACGCGAGCCCATCAGGGTCTTGCACGTGTTCATTTTCTCAGAAATGATAAGGCTGCTGCTTTGAAAGAAATGAGCAATCTTATTGAGAGGGCAAGAAACAATGCTTCAGCTTACGAGAAGAGGTCTGAGTATGGTGATCGTGAACTCACAAAGTCTGATCTGGAGATGGTCACTAGATTAGATCCTCTTCGGGTGTATCCTTACAGATATCGAGCAGCAGTTTTGATGGACAACCACAAGGAAGAGGAAGCCATTGCTGAACTCTCCAGAGCAATTGCATTCAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGAGATGTCTTAAGTGCATTGAGAGATTGTCGTGCTGCACTCTCTGTGGACCCAAATCATCAGAAAATGTTGGAACTTCACTGTCGTGTTAATAGTCACGAGCCATGA 2664 0.4291 MRTFITAESCKEAHPNALNPQSWLQVERGKLPKLSSQSSSSSIESLIKVPQPPILPFFKPVDYVKVLAQIHEELELCSPQEQSNLFLLQYQVFRGMGDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQGEELVAQLLTACGKCEKEFEPIDVESHISFDKVLISQDSISMKGNHTSQYVIFTIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNISPSGMRAISYFSLTGSLLDVPQNLLVEISVFANKYCCERLKLACDRRLASLVSSREDALELMEYAVDQNSSVLAASCLQVLLRDIPNCFSDNRVVELFIHANRKELEVMVGPGIFALFCFLSEASMNLSSASDTTAHFLERLVDFAENEMQRLLAFHELGCVKLSRKEYDEAYGLFERAADAGHIYSVAGLARLDSMKGEKLLPYQKISSVISSGTPLGWMYQERSLYCDGDLRWKDLEKATELDPTLVYPYMYRSATLMRTENVQGALSEINRILGFKLSLECLELRFFIYLALEDYKAALRDVQSILTLCPSYKMFEGRVAASQLCTLVREHVEHWTIADCWARLYDCWSAVDDIESLSVIYQMLESDVAKGVLYFRQSLLLLRLSCPEAAMRSLQLAWQHASSEHERVVYEGWILYDSGHYEEGLQKAEESITIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDAAEDCYMKALKIQHTRAHQGLARVHFLRNDKAAALKEMSNLIERARNNASAYEKRSEYGDRELTKSDLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLSALRDCRAALSVDPNHQKMLELHCRVNSHEP* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1795 887 Gene3D Tetratricopeptide repeat domain 784 885 IPR011990 GO:0005515
Pvu7g1795 887 Coils Coil 751 782 - -
Pvu7g1795 887 Gene3D Tetratricopeptide repeat domain 600 774 IPR011990 GO:0005515
Pvu7g1795 887 PANTHER ETO1-LIKE PROTEIN 1 1 887 - -
Pvu7g1795 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Pvu7g1795 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Pvu7g1795 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Pvu7g1795 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Pvu7g1795 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Pvu7g1795 887 SUPERFAMILY TPR-like 383 740 IPR011990 GO:0005515
Pvu7g1795 887 Gene3D Potassium Channel Kv1.1; Chain A 175 319 IPR011333 -
Pvu7g1795 887 Gene3D Tetratricopeptide repeat domain 360 547 IPR011990 GO:0005515
Pvu7g1795 887 PANTHER ETO1-RELATED 1 887 IPR044631 GO:0010105
Pvu7g1795 887 SUPERFAMILY TPR-like 693 880 IPR011990 GO:0005515
Pvu7g1795 887 Pfam Tetratricopeptide repeat 711 741 IPR001440 GO:0005515
Pvu7g1795 887 SUPERFAMILY POZ domain 182 276 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1795 Pvu-Chr7 40890984 40896073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1795 711 871 Glycosyltransferase AT3G04240 26.901 5.78e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1795 - - gmx:100785039 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1604 1 41165637 41174813 Pvu7g1795 7 40890984 40896073 PCT