Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1793 ATGGAACCCAAGTTCACAATGAATTGTGGCCGAAATGAGTTCCTCAAAACCAGAACTGGTACTCATTTGCCAGAAAGCCCAAGAGTACCAATGGAGTTTCTTTCAAGATCATGGAGTGCCTCTGCTATTGAGGTCTCTAAAGCCCTTGCACCTCCACCACCTCCTTCTTCTTACACACCTTCCAAGCCTCCCATTATACCCTCTTGTGTCACCAACTCCATTTCCGAAGAAACCTCTTCTGCTAAGTCAGAGGAATTCTCAGCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCCGCTACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAGAGAGGAAGTGTCTCCATTAACGTCTGGTAGACTATCTCACAGCAGTGAACCTTTGAATGGTGGTGCTTCTTTAACCGGGACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTCCATTCACCCCTTATTCAATGGTGGGCGAGCCATGAGTGGTGCTACAGGCAATGCCACTCCTTGCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAACTTCATGCTGCCATTTCTGTTGCTGCCTTAGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGCCACATCTGCGGCTTCCAAGGATGAGAAGATGGCCATGTCTGTTGCTTCTGCGGCCACTTTAGTTGCTGCTCAGTGTGTAGAGGCCGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATCGAAGGAGGTGTGGAATATTAATGCAGTGACTCCATTAGAGAAAGGAGCAGTTATTGGAATATGTGGTAAAAGCAACAACAGTAATTCTAGCACCAGTGATAGTGGGGAGATTATGAATGGTGACAATTTTTTGGGTTCCTGCAACCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAAAGGACCCGCAAAGGTGATCTTCACTGGAAAGTAGTTTCAGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGTAGGAACTATTACCAAAAAGAAAAAGAATGTTGTGTTGGATGTGTGCACAAATTTAGCAGCGTGGCCAGGACGGCATCTGTTTAATGAGGGTGAAGAAAGAAGGTATTTTGGATTGAAGACGGAAGCCAGGGGCATTGTGGAGTTTGAATGTAGAAATCAAAGAGAATATGATATTTGGACCCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAAATGGGGTTTGA 1458 0.4623 MEPKFTMNCGRNEFLKTRTGTHLPESPRVPMEFLSRSWSASAIEVSKALAPPPPPSSYTPSKPPIIPSCVTNSISEETSSAKSEEFSATMCGNQFSFASSATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHAAISVAALAAAVAAVTAATAATSAASKDEKMAMSVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARASKEVWNINAVTPLEKGAVIGICGKSNNSNSSTSDSGEIMNGDNFLGSCNQELLARGTALLKRTRKGDLHWKVVSVYIHRTGQVMLKMKSRHVVGTITKKKKNVVLDVCTNLAAWPGRHLFNEGEERRYFGLKTEARGIVEFECRNQREYDIWTQGVSRLLSIVARRQNLNGV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1793 485 MobiDBLite consensus disorder prediction 116 151 - -
Pvu7g1793 485 PANTHER EXPRESSED PROTEIN 1 483 IPR040269 -
Pvu7g1793 485 PANTHER AUXIN CANALIZATION PROTEIN 1 483 - -
Pvu7g1793 485 MobiDBLite consensus disorder prediction 116 148 - -
Pvu7g1793 485 Pfam Auxin canalisation 24 329 IPR008546 -
Pvu7g1793 485 Pfam Plant pleckstrin homology-like region 372 476 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1793 Pvu-Chr7 40874882 40879150 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1793 - - gmx:100782024 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1793 7 40874882 40879150 Pvu7g1793 7 40874882 40879150 ECH
Pvu1g1602 1 41152935 41156780 Pvu7g1793 7 40874882 40879150 PCT