Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1602 ATGGAGCCAAAGTGCACCATTAACTGTCGCCGGTCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCCATGGAGTTTCTGTCACGCTCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCTCTTTCACATCACCACTCATCTCTCTCCTCTTCTTGCATGCCTAATACAAACACTTCCATTCCTGAAGAAACTGTTCCCAACAACAGCTTTCTCTCTGAAGATTTCTCCACCATGTCTAAGAATCAGTTCTCTTTTGCTTCCTCAGCCACCTCTCAGCTTGTCCTTGAACGCATTATGTCACAGTCCACAAGAGAGGAAGTGTCTCCGTTAACGTCGGGTAGATTATCTCATAGCAGCGAGCCTTTGAATGGCGGTGGTTCCTTAACCGGAACAGATAGCCCTCCGATTTCGCCTTCAGATGAGTTTGATGACGTTGTTAAGTTTTTTCGGGCAAATAATTCCATTCACCCTTTATTCAATGGTGGACGAGCCAGTGCAACTATTGGCAACGGCACAGCATGCTCGGGACCTAAAACTGTTGGAAGATGGTTAAAGGACCGAAGAGAGAAGAAGAAAGAAGAAACCAGGACCCATACTGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCTGCTGCCGTTGCAGCTATTGCGGCTGCAACAGCAGGCTCGTCTGCTCCCAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCAGTTGCTTCCGCAGCCACATTAGTTGCTGCACAATGTGTAGAGGCTGCAGAAGCTATGGGGGCCGAGCGTGACCACCTTGCTTCTGTGGTCAGCTCTGCTGTGAATGTCCGTTCTCATGATGATATTACTACTCTTACAGCTGCAGCTGCCACAGCTCTACGAGGAGCAGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATAGCCACAGTGACACCACTAGAGCGAGGCATAGGGGGGATTGGACTATGTGGTAAAAGTAATAATAGCAATACTAGCAACACCAGCACCAGTGATAGCGGGGAAGTTTTCAATGGAGAAAATTTTCTAGGTGCCTGCAGCCAAGAGCTTATTGCCAAGGGCAGTGAATTGCTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTCTATATACATCGAACCGGCCAGGTAATGCTGAAAATGAAAAGCAGACATGTGGCAGGAACAATTACCAAAAAGAAAAAGAATGTTGTGCTAGATATTTGCACGGATTTACCAGCATGGCCAGGGAGACATCTGTTTGATGATGGTGAAAAGCGACGATACTTTGGATTGAAGACAGACCAAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGACATCTGGACACAAGGGGTTTCGAGGCTACTCTCCATTGTAGCACAAAGACAAAACAGATATGGGAATTGA 1452 0.478 MEPKCTINCRRSEFVPTPLPESPRVPMEFLSRSWSASALEVSKALSHHHSSLSSSCMPNTNTSIPEETVPNNSFLSEDFSTMSKNQFSFASSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEETRTHTAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSNNSNTSNTSTSDSGEVFNGENFLGACSQELIAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLFDDGEKRRYFGLKTDQRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRYGN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1602 483 Pfam Auxin canalisation 20 322 IPR008546 -
Pvu1g1602 483 MobiDBLite consensus disorder prediction 107 140 - -
Pvu1g1602 483 Pfam Plant pleckstrin homology-like region 369 474 IPR013666 -
Pvu1g1602 483 PANTHER EXPRESSED PROTEIN 1 483 IPR040269 -
Pvu1g1602 483 MobiDBLite consensus disorder prediction 107 144 - -
Pvu1g1602 483 PANTHER AUXIN CANALIZATION PROTEIN 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1602 Pvu-Chr1 41152935 41156780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1602 - - gmx:100805743 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1602 1 41152935 41156780 Pvu1g1602 1 41152935 41156780 ECH
Pvu1g1602 1 41152935 41156780 Pvu7g1793 7 40874882 40879150 PCT