Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1784 ATGGCTTTTAGAGGGTTTGTCTTGTGTCTAGTTACGGCTATGGTGGCCACTATGTGGACTCAAAATGCTACTGCCCAATCAGGTTGCACCAATACACTGACTAGCTTGAGCCCTTGCCTCAACTACATAATGGGAAGTTCTTCAACCCCATCACCTTCATGTTGCTCACAGCTCTCAACCGTTGTCCAATCTTCACCACAGTGCCTTTGCTCCCTGCTTAATGGTGGTTCCACTTTCGGAATTACCATTAATCAAACTCTTGCTTTGTCTCTCCCTGGCGCTTGTAAAGTGCAAACTCCCCCAGTTAGCCAGTGCCAAGCTGGCAAAGGACCAACATCTCCTTCGACTGCTCCAGTTGGTTCTCCTTCTGATTCTTCAGCTGAATCACCTCAAGGGTCAACATCACCTTCTGCTTCAGACTTTCCCTCAGGTGCAGGATCTAAAACGGTGCCATCAACAAACGGTGGTTCATCTGATGGAAATGCTATTGAAGTCCCCTCCCACTTGGTGTTCTATCTTCTTGCCATTGTGTCGTGTGCCTTAACCTTCACCAAGTTCTGA 561 0.4777 MAFRGFVLCLVTAMVATMWTQNATAQSGCTNTLTSLSPCLNYIMGSSSTPSPSCCSQLSTVVQSSPQCLCSLLNGGSTFGITINQTLALSLPGACKVQTPPVSQCQAGKGPTSPSTAPVGSPSDSSAESPQGSTSPSASDFPSGAGSKTVPSTNGGSSDGNAIEVPSHLVFYLLAIVSCALTFTKF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1784 186 Gene3D - 26 105 IPR036312 -
Pvu7g1784 186 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Pvu7g1784 186 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Pvu7g1784 186 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Pvu7g1784 186 CDD AAI_LTSS 36 97 - -
Pvu7g1784 186 Pfam Probable lipid transfer 11 105 IPR016140 -
Pvu7g1784 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 182 IPR043325 -
Pvu7g1784 186 MobiDBLite consensus disorder prediction 105 159 - -
Pvu7g1784 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 182 - -
Pvu7g1784 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 106 IPR036312 -
Pvu7g1784 186 SMART aai_6 29 105 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1784 Pvu-Chr7 40707679 40708859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1784 1 177 Acyl Lipid Metabolism Gene Families AT2G48130 43.575 8.23e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1784 - - gmx:100306151 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1784 7 40707679 40708859 Pvu7g1784 7 40707679 40708859 ECH
Pvu7g1784 7 40707679 40708859 Pvu1g1593 1 41000278 41001805 PCT