Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1593 ATGGCACCCAGAAGGATTGAGATGCTGCTGAGCCTGTCCCTTGTGGTGGCTCTTTCTGGTGCCACATTGGGTCAATCTCAATCAAGTTGCACCAATGTGTTCATAAGTCTTGCTCCCTGCCTTGACTATGTAACAGGAAATGCTTCTACCCCTTCCTCTTCTTGCTGCTCTCAACTTGCCTATGTAGTGAGTTCACAGCCACTGTGCCTTTGTGAGGTTGTTAACGGTGGTGCTTCATCTATTGCTGCAAGTTTCAATATCAATCAGACCCGGGCTTTGGCTCTCCCCACTTCTTGCAACATTCAGACACCTCCCCTTAGCACCTGCACTGGCTCAGATTCTTCCTCACCAGCTCTTTCGGTTTCAAACTTTCCCAACTCCCCTTCAGGGATTGGATCTAACACTGTTTCATCAACGACTGGAGGTAGTAGAAGTGTCGGTGGTTCATCTCATGGAAATTCAAGTTCCACTACTAATTTATCATTTTCTTGGTTTTTCATGTTTGTCCTTGCAACCACTTTGACTTTCACCTTCAAGAGTACGACCTAG 549 0.4645 MAPRRIEMLLSLSLVVALSGATLGQSQSSCTNVFISLAPCLDYVTGNASTPSSSCCSQLAYVVSSQPLCLCEVVNGGASSIAASFNINQTRALALPTSCNIQTPPLSTCTGSDSSSPALSVSNFPNSPSGIGSNTVSSTTGGSRSVGGSSHGNSSSTTNLSFSWFFMFVLATTLTFTFKSTT* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1593 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 5 180 IPR043325 -
Pvu1g1593 182 MobiDBLite consensus disorder prediction 119 155 - -
Pvu1g1593 182 CDD AAI_LTSS 37 101 - -
Pvu1g1593 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 110 IPR036312 -
Pvu1g1593 182 SMART aai_6 30 109 IPR016140 -
Pvu1g1593 182 Gene3D - 27 107 IPR036312 -
Pvu1g1593 182 Pfam Probable lipid transfer 13 109 IPR016140 -
Pvu1g1593 182 PANTHER LIPID TRANSFER PROTEIN 5 180 - -
Pvu1g1593 182 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Pvu1g1593 182 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Pvu1g1593 182 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1593 Pvu-Chr1 41000278 41001805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1593 5 150 Lipid Metabolism Gene Families AT3G22600 48.387 4.22e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1593 - - gmx:100789510 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1593 1 41000278 41001805 Pvu1g1593 1 41000278 41001805 ECH
Pvu7g1784 7 40707679 40708859 Pvu1g1593 1 41000278 41001805 PCT