Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1772 ATGGAGCTCAGTAAAGTCACCCTAGAGATCTTCTCCAAACTGGAACACAAATGGCTCTCACATTGTAAACCCAACAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCGCACCTCCGATCCCCATGCTCAGGTCGCTGATTTCTTCGACATCGTCGCTGGCACTGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACAGCTTCGGCAGGCCGCTCTACACCGCCAGAGAAGCCGTCCGTCTAGTCACCGAGAGGAACTCCGAGCTCTATAAGTTCAAATCCGGAGGCGTATTCCGCCGACGCCGGAAACTCTCCTCCAGAAGCATGGATAATGTTTTGAAGCAAGTGTTCCAAAGGAAGGAGGACGGACGGTTGTTGACCTTGAAGGATACGTGCAAACCTCTCCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGTGCCGACGCGTCGGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCGACGCCGAGCCATTTCAAGCCGTTTGACTTGGCTTCTGTCGACGGCAAGACCTTGTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCGGCGGCCGTCACGCACGTTCTCCACAACAAGCACGATTTCCCGTCAGTGAACGGCGTGGATGATCTCCTAGTCCTTTCCTTGGGGAACGGATCTTCGAACACCAAAGCGTGCGAGAATCGCACGTGCTCCACACCGTCGGTTGTTGACATTGTGCTCAACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCCTCCGGTTTGGGAAGCGAAGCAATGAGGAAGGAGGAGGTGCTCAAAGAGAGAGGACTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCAACCGGAAAACCAAGCCCGCCGTCTAGTCCGTGCAAAGATTCCACCGTCAACCCTCTCGCTAACGGCCGCTAG 1140 0.5658 MELSKVTLEIFSKLEHKWLSHCKPNNKTRILSIDGGGTTAIVAGEALIHLEDQIRLRTSDPHAQVADFFDIVAGTGIGAILAAMITAGDSFGRPLYTAREAVRLVTERNSELYKFKSGGVFRRRRKLSSRSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDLASVDGKTLCSAVDGGLVMNNPTAAAVTHVLHNKHDFPSVNGVDDLLVLSLGNGSSNTKACENRTCSTPSVVDIVLNGVSETIDQMLGNAFCWNRTDYVRIQASGLGSEAMRKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSTVNPLANGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1772 379 MobiDBLite consensus disorder prediction 357 379 - -
Pvu7g1772 379 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Pvu7g1772 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Pvu7g1772 379 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Pvu7g1772 379 MobiDBLite consensus disorder prediction 363 379 - -
Pvu7g1772 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Pvu7g1772 379 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 379 - -
Pvu7g1772 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Pvu7g1772 379 PANTHER PATATIN-LIKE PROTEIN 6 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1772 Pvu-Chr7 40528758 40530675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1772 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 71.169 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1772 - - gmx:100777557 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1772 7 40528758 40530675 Pvu7g1772 7 40528758 40530675 ECH
Pvu1g1572 1 40654529 40656215 Pvu7g1772 7 40528758 40530675 PCT