Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1729 ATGATCTCCCCAAGGCCAGACCCTCTTTTGTCACACGCCCGCTTCTCCACCATGCTCAAGCTCCTCAAGAAGAACCTCCGCCGCCTCCTCCGCCGTCTCCGGTGTCCAATTCGCCGCCGCTCGAAGCCCAAAGTGGTAGTGATCAACAAGCTCGAGAAGAGCGCCCCAAAGGCCCAAACCGAGCCAAGCCCAAACCTTTCCGCGACGGTTCATCCCAACGCGCAATTGGGTGCTCCGAAGCCAATCCGGGTGGCGACGTTCAACGCCGCGCTGTTCTCCATGGCCCCGGCGCTCCCGAAAGGCGCACGCGAGTTGGGGGAGCAAAACGGCGTCGCTTCGAAGGCGAATTCGCGGCCGAGAAGCATATTGAAGCAGTCGCAATCAGTGAAAAAGACAGCAGAGGAGAGCGTTGGTAGCAGACAGAAGATGAGGGTTTCCATAAATTTGCCAGACAACGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGAGGGGTTGAAGGCGTGGTCGTGGGGGGGAGGTGGGGCCCACGTGAGTAACAGAACGGTGGTTGAGGTTCTGAAGGAAGTTGATGCAGATGTTTTGAGTCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCTGCGGCGCTGGGAATGAACTACGTCTTCGCCGAAAGCTGGGCACCCGAGTACGGCAATGCTGTCTTGTCCAAATGGCCCATCAAACGCTGCGTTTCTCACCAAATCTTCGATCAAACTGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTGCCTCAAGTAGGTGAACTTAACTTGTACTGTACCCATCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCCAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTAGATGAATCGGATTACTCCCAAGAAAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGACTAAAGACTACACTGATGCTAAGGACTATGCAGGGGAATGCGAGTCCGTTGTCATGATTGCCAAGGGACAAAGTGTCCAAGGTACATGTAAGTACGGAACTAGGGTAGATTACATATTATCATCATCAAATTCTCCATACAAGTTTGTTCCTGGTTCCTATTTAGTTCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTGAGGGAAAATGAGAAGCCTGAAGAAAAGGTCACAAAGAATACGCAACAACCAAGACAGAGAGTTGTAAAAATAACACAATCCACTCCTTCAAAAGGTATCTGGAAAACACACACTTAG 1389 0.4953 MISPRPDPLLSHARFSTMLKLLKKNLRRLLRRLRCPIRRRSKPKVVVINKLEKSAPKAQTEPSPNLSATVHPNAQLGAPKPIRVATFNAALFSMAPALPKGARELGEQNGVASKANSRPRSILKQSQSVKKTAEESVGSRQKMRVSINLPDNEISLLRSRQSSFSEHDKEGLKAWSWGGGGAHVSNRTVVEVLKEVDADVLSLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRCVSHQIFDQTDFRNVLKATIDVPQVGELNLYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKTKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVRENEKPEEKVTKNTQQPRQRVVKITQSTPSKGIWKTHT* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1729 462 MobiDBLite consensus disorder prediction 56 72 - -
Pvu7g1729 462 MobiDBLite consensus disorder prediction 108 141 - -
Pvu7g1729 462 MobiDBLite consensus disorder prediction 110 141 - -
Pvu7g1729 462 Pfam Endonuclease/Exonuclease/phosphatase family 185 416 IPR005135 GO:0003824
Pvu7g1729 462 Gene3D Endonuclease/exonuclease/phosphatase 174 426 IPR036691 -
Pvu7g1729 462 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 12 168 - -
Pvu7g1729 462 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 182 461 - -
Pvu7g1729 462 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 12 168 - -
Pvu7g1729 462 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 182 461 - -
Pvu7g1729 462 MobiDBLite consensus disorder prediction 50 74 - -
Pvu7g1729 462 SUPERFAMILY DNase I-like 83 423 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1729 Pvu-Chr7 40064853 40068791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1729 - - gmx:100801298 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1729 7 40064853 40068791 Pvu7g1729 7 40064853 40068791 ECH
Pvu1g1531 1 40065475 40068502 Pvu7g1729 7 40064853 40068791 PCT